| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:gex00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GETHOR_25780 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:gex03021]
GETHOR_25780 (rpoB)
03400 DNA repair and recombination proteins [BR:gex03400]
GETHOR_25780 (rpoB)
Enzymes [BR:gex01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GETHOR_25780 (rpoB)
Transcription machinery [BR:gex03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GETHOR_25780 (rpoB)
DNA repair and recombination proteins [BR:gex03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GETHOR_25780 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2915156..2919550)
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| AA seq |
1464 aa
MSVQQNIYRQRHNFSKIRSLVPIPNLIDIQKRSYDEFLQMNLLHSERETRGLKAVFESMF
PVQNGKNPDGSDATLEVEFLDYTVGHWACKCEKYLGLEHLRTQCKQCGHNIVSDHPKDPT
VDCPKCGTRNKNAATICDVCQEPVSMKQKMGMDECVERGATMAAPLKIRVRLNQFDRDDK
GNRRFKQSQDSEVYFGDLPIMTDRGTFIINGTERVIVSQLHRSPGVFFSIAPDKSLYSAQ
IIPYRGSWIEFELDSKGLLYARIDRKRKFLGATFMRALGLFSEDLNSNEPMLRHFYTPAT
FFLKKGKLSVALSDLLAGRKLGEAVKHPKTKEEILAKDKKITRRVLEQMEKAGIKDVPVE
REMLDGAVLLQDVVNMGTGEVLMEANEPFLQTHLEMFLANDVQSFDVFFPEADATGKVFS
ETLAKDHTEDSEEAAKELFKKIRPGEPATLESSKKLLYGMFFDGQKYDLSKVGRHKINAK
LGLNTDLEFRTLGTDDFIRTVHYLLRLKKYDTTRQDIGEIAPVRADDIDHLGNRRVRSVG
ELLENGFRVGLVRVQRAIKEKFSIAQDPNSPLQAHDLINSKPVIAAMKEFFGSSQLSQFM
DQTNPLSEITHKRRLSALGPGGLSRDRAGFEVRDVHTSHYGRICPIETPEGPNIGLISSL
SCYARINEFGFIESPYLKVENGRIVHFAKVTSVGDSKFGYMDVVRLEDLEDENKKLTKGG
KRPAKYEMHAFYLSAWEEDEHVIAQANVPVDKDGAITEEDVTVRVAGETKIVSRDKVTLM
DVSPKQVVSVAASLIPFLENDDANRALMGANMQRQAVPLIRTEAPIVGTGMEYVAAKDSG
ACVVCRRSGIVETVDANRIVVRVEDDPETEGIESGVDIYTLVKFARSNQNTCLNQTPLVK
KGEYVTEDQILADGPCTDHGELALGRNLVVAYMPWRGYNFEDAILISERVVKEDLYTTIH
IEEFEVHARDTKLGPEEITRDIPQVREEALKNLDDSGIIRTGATVKHGDILVGKVTPKGE
TILSPEEKLLRAIFGEKASDVKDASLTVPPGIEGTVVDIKVFTRKGQEKDLRTQQIERDQ
IAKWEKDLSDEERIIRAEAKKKIVTLLKGKELSEALTDDKGQKELLPKGKKLTQNMLEAV
SYHRFRQVSVAAGKNRIETEVLDILDKTESQLKVLRDILNERMERLLKGDELMPGVLKTV
KCYVAVKRKLQVGDKMAGRHGNKGVVSRILPVEDMPYLPDGRPVDIVLNPLGVPSRMNIG
QVLECHLGWAGKTLGVHFSTPVFDGAREADIKGFLTQAWEKNHKLGPDVTGKTKLFDGMT
GEAFEQPVNVGCVYMLKLHHLVDNKIHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAHVLQELLTYKSDDMHGRTQIYQAIIKGETIKDPGLPESFNVVKKELNALCIDV
EMLTREELDPGLTEEEPVAFSIEG |
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| NT seq |
4395 nt +upstreamnt +downstreamnt
atgagtgttcagcagaacatctaccgccagcgccacaacttctcgaagatccggtccctg
gttcccatccccaacctgatcgacatccagaagcgcagctacgacgagttcctccagatg
aacctgctccacagcgagcgggagacgcgcggcctcaaggccgtgttcgagtcgatgttc
cccgtgcagaacggcaagaatcccgacggcagcgacgccacgctggaagtcgagttcctc
gactacaccgtgggtcactgggcctgcaagtgcgaaaagtacctgggcctcgagcacctc
cgcacccagtgcaagcagtgcggccacaacatcgtgtcggaccacccgaaggatcccacg
gtggactgccccaagtgcggcacccgcaacaagaacgcagcgaccatctgtgatgtgtgc
caagagcccgtctcgatgaagcagaagatgggcatggacgagtgcgtcgagcgcggcgcc
accatggccgcccctctgaagatccgcgtgcgcctcaaccagttcgaccgcgacgacaag
ggcaaccggcgcttcaagcagagccaggattcggaagtctacttcggcgacctgccgatc
atgaccgaccgcggcaccttcatcatcaacggcaccgagcgcgtgatcgtgagccagctg
caccgcagccccggcgttttcttcagcatcgcgccggacaagagcctctacagcgcccag
atcatcccctatcgcggctcctggatcgagttcgagctcgattccaagggcctgctctac
gcccgcatcgaccgcaagcgcaagttcctgggcgccaccttcatgcgcgccctcggcctg
ttcagcgaagacctgaactccaatgagcccatgcttcggcacttctacacgccggcgacc
ttcttcctcaagaagggcaagctgagcgtggccctgagcgacctgctggcggggcgcaag
ctcggcgaggccgtgaagcaccccaagaccaaggaagagatcctcgccaaggacaagaag
atcacccgccgcgtcctcgagcagatggagaaggccggcatcaaggatgtgccggtcgag
cgcgagatgctcgacggcgccgtgctgctgcaggatgtggtgaacatgggcaccggcgaa
gtgctcatggaggccaacgagcccttcctccagacgcacctcgagatgttcctggccaat
gatgtgcagtccttcgatgtcttcttccccgaagcggacgccactggcaaggtcttctcc
gagaccctggccaaggaccacaccgaggacagcgaggaagccgccaaggagctcttcaag
aagatccgtcccggtgagccggccacgctggaatccagcaagaagctgctctacggcatg
ttcttcgacggccagaagtacgacctcagcaaggtgggtcgccacaagatcaacgcgaag
ctgggtctgaacaccgacctggaattccgcaccctgggcaccgacgatttcatccggacc
gtccactacctgctgcgcctcaagaaatacgacaccacccgccaggacatcggcgagatc
gcccccgtgcgcgcggacgacatcgaccacctgggcaaccgccgcgtgcggtccgtgggt
gagctcctcgagaacggcttccgcgtgggcctcgtgcgtgtgcagcgggccatcaaggag
aagttcagcatcgcgcaggaccccaacagccccctgcaggcccacgacctgatcaacagc
aagccggtcatcgcggcgatgaaggagttcttcggcagcagccagctctcccagttcatg
gatcagaccaacccgctgtccgagatcacccacaagcgccgcctctcggctcttggaccg
ggcggcctcagccgcgaccgcgccggcttcgaggtgcgcgatgtgcacacctcgcactac
ggccgcatctgccccatcgagaccccggaaggcccgaacatcggcctcatcagctcgctc
tcctgctatgcccgcatcaacgagttcggcttcatcgagagcccctacctcaaggtggag
aacggccgcatcgtccacttcgccaaggtcaccagcgtgggcgactccaagttcggctac
atggatgtggtccgcctcgaggatctggaagacgagaacaagaagctgaccaagggcggc
aagcgccccgcgaagtacgagatgcacgccttctacctctccgcctgggaggaggacgag
catgtcatcgcgcaggccaatgtgcccgtcgacaaggacggcgccatcacggaagaggat
gtgaccgtccgtgtcgccggcgagaccaagatcgtctcccgcgacaaggtcacgctcatg
gatgtgagtcccaagcaggtggtctccgtggccgcttcgctgattcccttccttgagaac
gacgacgccaaccgcgccctcatgggcgccaacatgcagcgccaggccgtgcccctcatc
cgcaccgaggcccccatcgtgggcaccggcatggagtatgtcgccgccaaggattccggc
gcctgcgtggtgtgccgccgctccggcatcgtcgagaccgtggatgccaaccgcatcgtg
gtgcgcgtcgaggacgatcccgagaccgagggcatcgaatccggggtggacatctacacc
ctggtgaagttcgcccgcagcaaccagaacacctgcctcaaccagacccccctcgtgaag
aagggcgaatatgtcaccgaggaccagatcctcgcagacggcccctgcaccgaccacggc
gaactggccctgggccgcaacctcgtcgtggcctacatgccctggcgcggctacaacttc
gaggacgcgatcctgatctccgagcgcgtggtgaaggaagacctctacaccaccatccac
atcgaggagttcgaggtccacgcccgcgacaccaagctgggccccgaagagatcacccgc
gacatcccccaggtccgcgaggaggccctcaagaacctcgatgacagcggcatcatccgc
accggcgccaccgtcaagcacggcgacatcctggtgggcaaggtcacgcccaagggcgag
accatcctcagccccgaggagaagctgctccgcgccatcttcggcgagaaggccagcgat
gtgaaggacgccagcctgaccgtgccccccggcatcgaaggcaccgtggtggacatcaag
gtcttcacccgcaagggccaggagaaggatctgcgcacccagcagatcgagcgcgaccag
atcgccaagtgggagaaggatctctccgacgaggagcgcatcatccgcgccgaggccaag
aagaagatcgtgaccctgctgaagggcaaggaactttctgaggccctcacggacgacaag
ggccagaaggaactgctgcccaagggcaagaagctcacccagaacatgctcgaggccgtg
tcctaccaccgcttccggcaggtgtccgtcgccgcgggcaagaaccgcatcgagaccgag
gtgctggacatcctcgacaagaccgagagccagctcaaggtcctgcgcgacatcctgaac
gagcgcatggagcgcctgctcaagggcgacgagctcatgcccggcgtcctcaagaccgtg
aagtgctatgtggccgtgaagcgcaagctgcaggtcggtgacaagatggccggccgccac
ggcaacaagggcgtggtcagccgcatcctccccgtggaggacatgccctatctgcccgac
ggccgccccgtggacatcgtgctgaaccccctcggcgtgccttcccgtatgaacatcggc
caggtgctcgagtgccacctcggctgggccggcaagaccctcggcgtccacttctccacg
cccgtcttcgacggcgcgcgcgaagccgacatcaagggcttcctcacccaggcctgggag
aagaaccacaagctgggccccgatgtcaccggcaagaccaagctcttcgacggcatgacc
ggcgaggccttcgagcagcccgtgaatgtgggctgcgtctacatgctcaagctgcaccac
ctcgtggacaacaaaatccacgcccggagcattggaccctacagcctcatcacccagcag
cccctcggtggcaaggcccagttcggcggccagcgcttcggcgagatggaagtctgggcg
ctcgaggcctacggcgcggcgcatgtgctgcaggaactcctcacttacaagtccgacgac
atgcacggccgcacccagatctaccaggccatcatcaagggcgagaccatcaaggatccc
ggcctccccgagagcttcaacgtcgtgaagaaggaactcaacgcgctctgcatcgatgtc
gagatgctcacccgcgaagagctggatccaggcctgacggaagaagagcccgtcgccttc
tccatcgaaggctga |
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