Georgenia wutianyii: FE251_08235
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Entry
FE251_08235 CDS
T06026
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gez
Georgenia wutianyii
Pathway
gez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FE251_08235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gez03019
]
FE251_08235
03009 Ribosome biogenesis [BR:
gez03009
]
FE251_08235
Enzymes [BR:
gez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FE251_08235
Messenger RNA biogenesis [BR:
gez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FE251_08235
Ribosome biogenesis [BR:
gez03009
]
Prokaryotic type
rRNA helicases
FE251_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QDB79359
LinkDB
All DBs
Position
1840300..1842072
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AA seq
590 aa
AA seq
DB search
MGSSVLTAVLTDLAPARPETGFAGLGLPDDLLSAVVDLGFTTPTDIQIEAIPLLLAGRDV
VGVAQTGTGKTAAFGLPLLAAVDPRVRQVQALVLAPTRELAMQVSDAIASFASHLRGLTV
LPIYGGSSFVPQLRGLRDGAQVVVGTPGRVMDLMEKGSLDLSGVRFLVLDEADEMLRMGF
AEDVEQIAARVPASRRTALFSATMPAAIKKVAATHLNDPVRVSVTPASSTVSNIDQTFAV
VPFRHKVGALSRVLAISDADAAIIFVRTKSAADEVAIELAGRGIQAAAISGDVAQRDRER
LIDRLRSGTLDVLVATDVAARGLDVERIGLVVNFDVPRETETYVHRIGRTGRAGRSGRAL
TFLTPRERGRLSQIERATGSRLREIDIPTPADVSAHRASSMLSKVDERLAAGRLDLYREI
LDGSDHDLREMAAALLAIAVGDEGPAPRIVERFDDEGPRRRREENYDDSGEFVGAKFEEG
RDHERLAPRGRAGTRPRHRDASGSGTRYRVEVGHRDGVQPGAIVGAITGEGGLRGQDLGK
IDIFPSFSLVEISQELSPETSRKIGAARVAGRPLRIRPDMGPRKPSGPRR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttccgtcttgactgctgttctcaccgaccttgcccccgcacgcccggagacc
ggtttcgccggcctcggcctgcccgacgacctgctctccgccgtcgtcgacctgggcttc
accacccccaccgacatccagatcgaggcgatcccgctgctgctcgcgggccgcgacgtc
gtcggcgtcgcccagaccggcaccggcaagacggcggccttcggcctgccgctgctcgcc
gccgtcgacccgcgcgtccgacaggtccaggcgctcgtcctcgcccccacccgtgagctc
gcgatgcaggtgagcgacgcgatcgcgtcgttcgcctcgcacctgcgcggcctcaccgtg
ctgccgatctacggcggctcgagcttcgtgccccagctgcgcggcctccgcgacggcgca
caggtcgtcgtcggcacgcccggtcgcgtcatggacctcatggagaagggcagcctcgac
ctctccggcgtccgcttcctcgtcctggacgaggccgacgagatgctccgcatgggcttc
gccgaggacgtcgagcagatcgccgcccgcgtgccggccagccgccgcaccgcgctgttc
tccgcgacgatgcccgccgcgatcaagaaggtcgccgccacccacctcaacgacccggtg
cgcgtcagcgtgacccccgcgtcctcgacggtgagcaacatcgaccagaccttcgccgtc
gtgcccttccggcacaaggtcggtgcgctgtcccgcgtgctcgcgatcagcgacgccgat
gccgccatcatcttcgtgcggaccaagtccgccgccgacgaggtcgccatcgagctcgcc
ggccgcggcatccaggccgccgccatctccggcgacgtcgcccagcgcgaccgtgagcgc
ctgatcgaccgtctccgctccggcaccctcgacgtcctcgtcgccaccgacgtcgccgcc
cgcgggctcgacgtcgagcgcatcggcctcgtcgtcaacttcgacgtgccgcgcgagacc
gagacctacgtgcaccgcatcggtcgtaccggccgcgccggccgcagcggccgcgccctg
acgttcctcaccccgcgcgagcggggccgcctcagccagatcgagcgcgccaccggcagc
cgtctgcgcgagatcgacatccccaccccggcggacgtctcggcccaccgcgcctcctcg
atgctgtccaaggtcgacgagcggctcgccgccgggcgcctggacctctaccgcgagatc
ctcgacggctcggaccacgacctgcgtgagatggccgccgccctcctcgcgatcgccgtc
ggcgacgagggtcccgcgccccgcatcgtcgagcgtttcgacgacgagggtccccgccgt
cgtcgcgaggagaactacgacgactccggcgagttcgtcggcgccaagttcgaggagggg
cgtgaccacgagcgcctcgcgccccgcggccgcgccggcacccgcccccgtcaccgcgac
gcctctggttccggcacccggtaccgcgtcgaggtcggccaccgcgacggcgtccagccg
ggcgcgatcgtcggtgcgatcaccggcgagggcggccttcgcggccaggacctcggcaag
atcgacatcttcccgagcttctccctcgtggagatcagccaggagctgagcccggagacc
agccgcaagatcggggccgcgcgcgtcgccgggcgtcccctgcggatccgtccggacatg
ggcccgcgcaagccctccggaccgcgccgctga
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