Gluconobacter frateurii: MKW11_02825
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Entry
MKW11_02825 CDS
T08020
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gfa
Gluconobacter frateurii
Pathway
gfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKW11_02825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfa03019
]
MKW11_02825
03009 Ribosome biogenesis [BR:
gfa03009
]
MKW11_02825
Enzymes [BR:
gfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MKW11_02825
Messenger RNA biogenesis [BR:
gfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MKW11_02825
Ribosome biogenesis [BR:
gfa03009
]
Prokaryotic type
rRNA helicases
MKW11_02825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
UMM09019
LinkDB
All DBs
Position
complement(593423..595237)
Genome browser
AA seq
604 aa
AA seq
DB search
MPFPDTHPALGRALTARGYEQPTPVQEAVLQPGLEDRDLLVSAQTGSGKTVAFGLAIAPT
LLGEADRLPPSPQPLALVIAPTRELALQVQSELEWLYAETGARIASCIGGTDARREARDL
NRGAHIVVGTPGRLCDHQSRGSLDLSGLRCVVLDEADEMLDMGFRDELEQLLDASPAERR
TLLFSATIAREIASLAKRFQKDAKRIDTVTGAKQHSDITYRCVVTAPQEIERSLVNVLRF
YESPTAMVFCNTRMMVGQVQAALLERGFASVAISGEMGQNERSRAIESLRSGQARVCVAT
DVAARGIDVPALNLVIHASIPTASETLLHRSGRTGRAGRKGTSVLMVPMNQRRRAERLLA
MARVNAEWEAVPTAAAIAAQDTQRLLEDPILANASEETTDELVLKLAETYDAKKLAAALV
EMYRARLPQVEQIRPMSVEAPSSRGERGERGERAPREERVVSGQWFKMGVGRTERADPKW
LIPLICRLGNVQKRDIGSIRIEQDQTYFQITDESVERFKSCVAGAEPDEVTIEPSAEPAG
GGYGSRGRNPGEGKRFGRPGGGGGFKGGPRSGGGGGYKGRGGAGFSRSKSSGPTGEGTSR
KRRS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcctttccccgatactcatcctgcccttgggcgcgccctgacggcgcgcggctacgaa
cagccaactcccgttcaggaagccgttctgcagccagggctggaggatcgtgatcttctg
gtttccgcccaaacgggctcaggcaagaccgtagcctttggtctggccattgcgccgacg
ctgctgggcgaggccgatcgcctcccgccgtcgccgcagccgctggctctggtcattgcc
ccaacgcgtgaactggccctgcaggtccagtccgaacttgaatggctctatgccgaaacc
ggtgcccgcattgcgagctgcattggtggcacggatgcccgccgtgaagcccgcgatctc
aaccgtggcgcccatatcgtcgttgggacgccgggccgcctgtgtgatcatcagtcccgt
ggttcccttgacctgtccggtctgcgctgcgtcgtgctcgacgaagctgacgaaatgctg
gacatgggtttccgtgacgagctggaacagcttctggatgcgtccccggccgagcgccgt
acgctgctgttctccgccacgattgcccgcgaaattgcgtccctggccaagcgtttccag
aaagatgccaagcgcattgatacggtaacgggtgcgaagcagcattccgatatcacctat
cgctgcgtcgtaacggctccgcaggagatcgagcgttccctcgtgaacgttctgcgtttc
tacgagagcccgaccgccatggtgttctgcaacacccgtatgatggttggtcaggtgcag
gctgctcttctggagcgtgggttcgcctctgtcgccatttctggtgagatgggtcagaac
gagcgtagccgtgcgatcgagagcctgcgttccggtcaggcccgtgtctgtgttgcgact
gacgttgcagcccgtggcattgacgttccggcgctgaacctcgtcattcatgcaagcatc
ccgacggcttctgaaacgctgctgcaccgttccggccgtacgggtcgtgcaggtcgtaag
ggcaccagtgtgctcatggtgccgatgaatcagcgtcgtcgcgctgagcgtctgctggcc
atggctcgcgtgaatgctgagtgggaagcggttccgacggctgcggcgattgccgcccag
gacacacagcgtcttctggaagatccgattcttgccaacgcctcggaagagacgacggat
gaactggttctgaagctggccgaaacttacgacgccaagaagctcgcagcggcgctggtg
gaaatgtatcgtgcccgccttccgcaggtcgagcagatccgtccgatgtccgttgaagct
ccgagcagccgtggtgaacgcggcgagcgtggggaacgtgctccgcgtgaagagcgtgtt
gtgtccggtcagtggttcaagatgggcgttggccgcaccgagcgtgccgatccgaagtgg
ttgatcccgctgatctgccgtcttggcaatgttcagaagcgtgacattggcagcatccgc
attgagcaggatcagacctatttccagatcacggatgagagcgtcgagcgcttcaagtcc
tgtgttgctggtgccgagcctgatgaagtgacgatcgagccatctgccgagcctgctggc
ggcggttatggttcgcgtggccgtaatccgggcgaaggcaagcgctttggtcgtcccggt
gggggcggtggcttcaagggtggcccgcgttccggcggcggtggcggatacaagggccgt
ggcggcgctggtttcagccgttccaagtccagcggtccgaccggtgagggaacgagccgc
aagcgccgttcctga
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