Gluconobacter frateurii: MKW11_04235
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Entry
MKW11_04235 CDS
T08020
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gfa
Gluconobacter frateurii
Pathway
gfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MKW11_04235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfa03400
]
MKW11_04235
Enzymes [BR:
gfa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MKW11_04235
DNA repair and recombination proteins [BR:
gfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MKW11_04235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
IBP39
Motif
Other DBs
NCBI-ProteinID:
UMM09281
LinkDB
All DBs
Position
complement(904269..905711)
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AA seq
480 aa
AA seq
DB search
MSVVITLADTSAFEPWRQTARAALQRDVPPEQIVWRLQGKDADLFSQAETTSFAGEIRRD
VRLKAANLPVLKDVLCHSSPERFALAYRLLWRLQDDPDLLSIPTDPDVGQARRMVQQVRR
AAHKMTAFVRFREQDPAENGRRRFLSWFEPDHHVLEKVSSFFAKRFADMDWLILTPRGSI
SWDGATLNCSFTPCEKQALEDDVERLWQTYYASTFNPARVRTKAMRNEMPRRYWKNLPEA
SLIPQLVAEAEKRVAEMAAREALPAPKFHQAIQARQRAITVQEHALGGMTELAQDIRACR
ACSLQCHATQAIVGEGPETAKVMIVGEQPGDQEDLAGRPFVGPAGQLLMGCLEEVGVARE
ALYLTNAVKHFRFTVNGRRRIHQTPGVEHISACQPWLKREIALVKPRLIVSLGATALRAI
SGPSERLKDVRGTLRAREGEGWAHLSLAHPSWILRLGPTAQAEQERQALIAGLRQIKGVL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgttatcactctggcagataccagcgcattcgaaccctggcgtcagactgcg
cgggccgccctgcagcgtgatgttcctcccgaacagattgtctggcgtctgcaaggaaag
gacgcagatcttttctcccaggcagaaacgacgtcttttgctggggagatcaggcgggac
gtcagattgaaagccgccaatctgcctgttctgaaagatgttctgtgtcattccagcccg
gagcggtttgccttggcgtatcgcctgctctggcgtctgcaggatgatccggatcttctg
tccatccccacggatccggatgttggtcaggcacgacgtatggtgcagcaggttcgccgg
gcagcacacaaaatgactgccttcgtgcgcttccgggagcaggacccagcagaaaatggc
cggcggcgcttcctgtcatggttcgagccggatcatcatgtcctggagaaagtctcgtcc
ttttttgccaagcgtttcgctgacatggattggcttatcctgacgccgcgaggctccata
agttgggatggcgccacgctgaattgctcattcacgccgtgtgaaaagcaggcccttgag
gatgatgtcgaacgtctgtggcagacttattatgcttcgactttcaatccggcccgggtt
cgcacaaaagccatgcgcaatgagatgccgcgccgctactggaagaacctgccggaagcg
tctctgattcctcaactcgttgcggaagctgaaaaacgtgttgcggaaatggccgcaagg
gaagcactgccggcgccaaaatttcatcaggctattcaagccaggcagcgagccatcacc
gttcaggagcacgctcttggtggaatgacggagcttgcacaggatattcgcgcctgccgg
gcgtgctctttgcagtgtcacgccacacaggcgattgtgggagaagggccggaaacggcg
aaggtgatgatcgtcggggagcagcctggagatcaggaagatctggcaggccgtccattt
gtgggacctgccggacagcttctgatgggatgtctggaagaagtcggcgtcgcccgcgag
gctctttacctgacgaacgccgtcaagcatttccgatttacggtcaacggccgacggcgc
attcaccagacgcccggtgttgagcatatttcggcctgtcagccatggctcaaacgggaa
attgccttggtgaagccgagactaattgtctcattgggggcaacggctctacgggcgata
agtggtccctcagagcggttgaaagacgtccgtggcacgttgcgtgcccgtgagggtgag
ggctgggcgcatctcagcctggctcatccatcttggattctccgtctcgggccaacggca
caggcggagcaggaacgtcaggccctgattgccgggctgaggcagatcaagggtgttctc
tga
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