Gluconobacter frateurii: MKW11_09260
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Entry
MKW11_09260 CDS
T08020
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
gfa
Gluconobacter frateurii
Pathway
gfa02020
Two-component system
gfa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKW11_09260 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MKW11_09260 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfa03021
]
MKW11_09260 (rpoN)
Transcription machinery [BR:
gfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKW11_09260 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_3
HTH_31
HTH_Crp_2
HTH_Tnp_ISL3
MarR_2
HTH_IclR
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
UMM07415
LinkDB
All DBs
Position
complement(1985917..1987194)
Genome browser
AA seq
425 aa
AA seq
DB search
MTPQLRQAIAMLQLGHQELTQSLQQIAELNPLLVLEPTDTVALPEPAEAPDYHDDDPDRF
TSGAEQPETAAPGPSLHDDLSSQIHLAFPEHQDRAAALYLLASLDDAGRLPEPVSDIAHV
LGMETAALESIRRILMRLDPAGLFCRSLEECLAVQLERCGRLDPAMKILLANLDLLARRD
WRLLRQKCQLEQEDLLDMLAEIQALNPRPGFDPRHPVLPIQPDLIVRKNGDGFRLTFNHR
TMSRCHVDTAIQRHIDGSTEAGRQLQTYANEASAIIRALEMRRQTILKVGAEIIRQQTAF
FESGISALRPLTMRDLATATDVHESTVSRVVNGKYMDTPRGIVPLRMFFSTALQASDGSV
QSASAIQHRLRALIAAEEDDILSDDALTALLQKEGFAIQRRTVAKYREGLGIAKSSQRRR
LKKTS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacgccacagttgcgtcaggcgattgcgatgctgcaactcggccatcaggaactgacg
cagtccctccagcagattgcggaactcaatcccctgctcgttcttgagccaaccgataca
gtcgcgcttccagaacctgccgaagcgccagattaccatgacgacgatccggatcgtttc
acgtcaggagcggaacaacctgaaaccgccgctcccggcccttccctccatgacgatctg
agcagccagatccacctggcctttcctgaacaccaagatcgggccgcagcactgtatctt
ctggccagcctcgacgatgcaggacgtcttcccgagcctgtttccgacattgcacacgtt
ctcggcatggagacagccgctcttgagtctatccgacgcattctgatgcggctggaccct
gccggcctattttgccgctctctggaagaatgcctggctgtgcagttggagcgttgcggt
cggctcgatcccgccatgaaaatcctgctggccaaccttgatcttctggcccggcgtgac
tggcggcttctgcgccagaaatgtcagcttgagcaggaggatctgctcgatatgctggca
gaaattcaggcccttaatccccgtcccggtttcgatccacgccaccccgtcctcccgatc
cagcccgatctaatcgtccgcaagaacggagacggttttcgtcttaccttcaaccatcgc
accatgtcccgctgccatgtagacacggccatacagcgccacatcgatggcagcacggag
gcagggcgacaactccagacctatgccaatgaagccagcgctatcatccgtgcgctagag
atgcgtcgccagaccattctgaaagtcggagcggaaatcatccgtcagcagaccgctttt
ttcgaaagcggaatttctgccctccgtcccctcaccatgcgcgatctcgctaccgcgaca
gacgtgcacgaaagcacggtcagccgcgtcgtaaacggcaaatacatggacacgccacgt
ggtatcgtgccgcttcgtatgttcttctcaacagcccttcaggccagtgatggctcggtt
caaagcgccagcgccattcagcatcgtctgcgtgccctcattgccgcagaagaagacgac
attctttcggatgatgccctgacagccctgcttcagaaagagggctttgccattcagcgc
cgcaccgttgcgaaataccgggaaggtctgggcatcgcgaaatcaagccagagacggcgc
ctgaagaaaacgtcctga
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