Geosporobacter ferrireducens: Gferi_00705
Help
Entry
Gferi_00705 CDS
T04493
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gfe
Geosporobacter ferrireducens
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfe03016
]
Gferi_00705
Enzymes [BR:
gfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Gferi_00705
Transfer RNA biogenesis [BR:
gfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Gferi_00705
Prokaryotic type
Gferi_00705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA
UPF0113
Motif
Other DBs
NCBI-ProteinID:
AOT68232
UniProt:
A0A1D8GBF4
LinkDB
All DBs
Position
complement(138866..139759)
Genome browser
AA seq
297 aa
AA seq
DB search
MDGIINLLKPPHMTSHDTVGYLRRLLKTKKVGHTGTLDPMAAGVLPICIGNATKVSQFLL
NDSKVYRCELTLGYNTDTQDRWGKVIKEGKVDATKDEIIKVFDEFKGEILQKPPMYSALK
HQGRKLYELAREGKTVEREARKVTIHELNILDIQSEKILFDVYCSKGTYVRTLCEDIGNR
LNAGGHMSFLLRTSSGRFTLKETVTVEQLQELQLEDIEQNHLFPMDYPLLEMPSVHIKSN
SIKYLLNGNNMLHKNILRHDPMRENQYVRVYAEQKFMAVGIVKKDEEFYIDIHRVFN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggatggtattattaatctattaaaacccccccatatgacttctcatgatacagtagga
tatcttcggagactgcttaagactaaaaaggtagggcatacaggtacattagatccaatg
gcggcaggtgttttaccaatctgtattggaaatgctacaaaagtcagtcaatttttactg
aatgattctaaagtttatcgatgcgaattgacattaggctataatacagatacgcaggat
cggtggggaaaagtcataaaagagggtaaggtagatgcaaccaaagatgaaattatcaaa
gtatttgatgaatttaaaggagaaattctccagaaaccgccgatgtattctgcattaaaa
caccagggcaggaagctgtatgaattagctagagaaggaaaaactgtagagcgtgaggct
agaaaagtaactattcatgagcttaatatcttagatatacaaagtgagaagatattattt
gatgtatattgctcaaaaggaacctatgtcagaacattgtgtgaagatattggaaatcgc
ttgaatgctggtggtcatatgtcttttttacttagaacatccagtggcaggtttacattg
aaagaaacggttacagtagagcaactgcaagagttacagttggaagatattgaacaaaac
catcttttcccaatggattatcccttattggaaatgccaagtgttcatataaaatccaat
tcaattaagtatctattaaatggcaataatatgctacataaaaacatcctccgacatgac
ccgatgagagaaaaccaatatgtgagagtttatgcagagcaaaagtttatggcagttggt
attgtaaagaaagatgaagaattttacattgatattcatagagtttttaattaa
DBGET
integrated database retrieval system
