Geosporobacter ferrireducens: Gferi_01980
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Entry
Gferi_01980 CDS
T04493
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe00550
Peptidoglycan biosynthesis
gfe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gferi_01980
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gfe01011
]
Gferi_01980
Peptidoglycan biosynthesis and degradation proteins [BR:
gfe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Gferi_01980
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AOT68467
UniProt:
A0A1D8GC35
LinkDB
All DBs
Position
complement(388927..390954)
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AA seq
675 aa
AA seq
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MSTPSIANKKRLVVLLFTVCFILFGLIFRIGWIQIVDGERYRQLAHMQQTRDIPIPAKRG
VVFDRKGKELAISASTSTVWARPAEVERSGKADEISKELAAILEKDEIEIKEKLTRKNVG
LIKIEKWIDKEKADAIRQAKMEGVWIAEDNRRHYPFGTFAAHILGHTTDDNRGLVGIELE
YDKYLSGLPGRWIKNTDAAGRQLPYGVEKYYKPENGLNVVLTIDEVIQHFTEKALDSTLA
QTQAKKVIAIVMDPKTGDILAMATKPDFDPNSPRIPTSEEKKREFENLDTKEQQKLWNEM
WRNPMISDTYEPGSTFKLITSAAGLEEGVVEPNSPFYCSGHITVAGQRIRCWRYYNPHGA
QTFTVGVQNSCNPVFIEIGQRLGVENYYKYIEAFGFTKITGVDLPGEGNAIVQSKERVGP
VELATISFGHGISVTPLQLVNAIAAIGNDGKLMKPRIVKELVDDEGNVIHRYEPKMIRQA
VSEKTARELRLIMESVVTDGSGKSAYIPGYRIGGKTGTADKIENGRYVSGKVYSSFVALA
PIDDPRLAVLVVVDEPQGVRFGSLTAAPAVHDILKDSLRYMDIEPQYNEKEAKQYAKEEV
TVPEVRNLTLKNAAKTLADRGLQYDTEPTTHGLQYDTEPTTAENPETIIVDQFPKPGAKV
PEKSIIILYLKRENP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaacacccagtattgctaataagaagagattagttgtattattatttacagtatgt
tttattttgtttgggctgatttttagaattggatggattcaaattgtcgacggggaaagg
taccggcaactggcccacatgcagcaaacaagagatattcctataccggcgaaacgtggc
gttgtttttgatagaaaaggaaaggaattagccataagtgcaagtaccagtactgtttgg
gcgagaccggcagaggtcgaacgctccggcaaggcagatgagatttctaaagaattggca
gctatcttagaaaaagatgaaattgaaatcaaggaaaaattgacaagaaaaaatgtcggt
ttgattaaaatagagaaatggattgacaaggaaaaggctgatgcgatccgtcaggcgaag
atggaaggtgtatggattgctgaagacaaccgcagacattacccattcggaacatttgca
gcccatatattgggtcatactacggatgacaaccgaggcttagtagggattgaacttgaa
tatgataaatacttaagcggattgccaggtagatggataaaaaatacagatgcagcagga
cgtcaattaccctatggagttgaaaaatactacaagccagagaatggattaaatgtagtt
ttaaccattgatgaagtcattcagcattttacagaaaaagcccttgatagtacgttggct
cagacccaagcgaagaaagtaattgctatcgtaatggatccgaaaactggcgatatttta
gcgatggctacaaaaccggatttcgatccaaatagtccaagaatacctacaagtgaggaa
aaaaagagggagtttgagaatttagatacgaaagaacagcagaagctatggaatgaaatg
tggagaaatcccatgatcagtgatacttacgaaccgggatcaacgtttaagctgattact
tctgcagcaggattagaagaaggagtagtagagccgaattctccattctactgctcagga
catatcactgtagcaggacagcggattcgatgctggagatattataatccccatggggcg
caaacctttaccgtaggagttcaaaattcatgcaatccagtatttattgaaataggccag
cgattaggggttgaaaattattataaatatattgaagcctttggatttacaaaaataacc
ggtgtagatttgcccggtgaaggaaacgctatcgttcaaagtaaagaacgtgtaggccct
gtagaactggcaaccatttcatttggacacggaatctccgtaacacctcttcagttggta
aatgcaattgcggcaattggaaatgacggaaaattaatgaaaccccgtattgtgaaggaa
ttggtcgacgatgaaggaaatgtaattcatcgctatgagccgaagatgattcgccaggca
gtgtcggagaaaactgccagagaacttcgtttgattatggaatcggttgtaaccgatggt
tcaggtaaaagtgcctatattccaggctaccggataggtgggaaaaccggtacagcagac
aaaattgaaaatggacgatatgtgtccggcaaagtttattcttcctttgttgcattggcg
cctattgatgatccccggcttgctgttctcgtggtggttgacgaaccgcaaggagtacgc
tttggtagtttaacagcagcgccggcagtccacgatattttaaaggatagtttgcgatat
atggacatagaaccccaatataatgaaaaagaagcaaagcaatatgcaaaggaagaagtt
accgttcctgaagttagaaatctgaccttaaagaatgctgcaaaaactttagcagatcgt
ggtctgcaatatgatacggaaccaacaactcatggtctgcaatatgatacagaaccaaca
actgcagagaatcctgagacaattattgtagatcaatttccaaaaccgggagctaaagtt
ccggaaaagtcaattattatattgtacttaaaaagagaaaatccataa
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