Geosporobacter ferrireducens: Gferi_02235
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Entry
Gferi_02235 CDS
T04493
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Gferi_02235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_02235
DNA repair and recombination proteins [BR:
gfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Gferi_02235
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Gferi_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
AOT68514
UniProt:
A0A1D8GC67
LinkDB
All DBs
Position
complement(438357..439100)
Genome browser
AA seq
247 aa
AA seq
DB search
MLIKTDAVVLKQSKFGEGDRIITLFTKKLGKVQAVSKASGRHKGKYAVGTQLFSYGEFVL
FKGRDLFQITQVDLRHSFYSIREDVTKLAYGAYLLELTLAAIGEGQTNNRLFELLINSLQ
IFSKSKKNMETIIKAYEMKLLYYSGYKPELECCVHCGTSEIGNPRFSSAEGGILCRNCFQ
QDLYAMKISPVTIRVMQYLITQELEQIAKLMIRTEVMEELNKITRHYIGTHLEKNAFKSL
EFLNHIK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgctaattaagaccgatgcagtggtcttgaaacaaagcaagtttggagaaggggacaga
attattaccctctttactaaaaagctgggaaaagtacaggcggtatccaaggcatctgga
agacataaagggaaatatgctgtgggtacacagctgttctcctatggtgaatttgttttg
tttaagggacgtgacttgttccaaattacgcaggtagatctaagacattccttttactcg
attcgtgaagatgttacgaaattagcctatggagcttatttattagagctaacactagct
gctataggtgaaggacaaacaaacaaccgtctgtttgaacttttaatcaacagcttgcag
atattctccaaaagtaaaaaaaatatggaaaccatcattaaggcttatgaaatgaagctg
ttatattattccggatataagcctgaattagaatgttgtgtacattgcggcacatcggag
ataggaaatccccgtttcagttcagcagaaggcgggattctatgtaggaattgcttccag
caagatctgtacgcaatgaaaatatctcccgttaccatacgggtaatgcagtatctaatc
actcaggaattggagcagattgcaaagcttatgattcgaacagaggttatggaggagtta
aacaaaattacgcggcactatattgggacccatttggagaagaatgcttttaaaagtcta
gaatttttaaatcatataaaataa
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