Geosporobacter ferrireducens: Gferi_03340
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Entry
Gferi_03340 CDS
T04493
Name
(GenBank) topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gfe
Geosporobacter ferrireducens
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfe03032
]
Gferi_03340
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_03340
Enzymes [BR:
gfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Gferi_03340
DNA replication proteins [BR:
gfe03032
]
Prokaryotic type
DNA Topoisomerases
Gferi_03340
DNA repair and recombination proteins [BR:
gfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Gferi_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
CBM27
Motif
Other DBs
NCBI-ProteinID:
AOT68694
UniProt:
A0A1D8GCR4
LinkDB
All DBs
Position
complement(644078..646267)
Genome browser
AA seq
729 aa
AA seq
DB search
MKNNIKKLNVIDTIETNYMPYSMSVIVSRALPEIDGLKPSHRKLLYTMYKMGLLKGQKTK
SANIVGQTMRLNPHSDMAIYETMVRLTRGNETLLHPYVDSKGNFGKNYSRDMAFAAPRYT
EAKLDSICEEFFNEIGNDTVDFVPNYDNTMQEPTLLPTTFPNILVNPNLGIAVGMASSIC
SFNLRELCDTTVRLLEDEGIDVIEYLKAPDFSSGGELIYNQKDMRKIYEEGRGTFYLRGK
YRYDKANSCIDIYEIPYTTNAETIIDQVTELVKAGTIKEITDVRDETDKNGLKITLDIKK
SADVEQLMLKIFKYTKLQDSFSCNFNILVNGHPRVLGVKAILLEWIDFRVGCIKRGLRYD
IERKTEKLHLLRGLEKILLDLDKAVQIVRDTKKDKEVIPNLMKGFEVDAAQAEFIAEIKL
RNFNQEYILMKTKDIKDLEKELKNLEETLNSEKKMKKIIIKQLDAVSKKYGQDRKTDIVE
EHHIEEISPEDLIEDYNIKLFLTKEGYLKKIPLISLRGSNGHKLKEGDTIIQEIDGTNKS
DLLFFTNKHTVYKKKVYELEDCKTSNLGDYLPNLLALEEKEEIIYMAATADYSGYMLFFF
KNGKCAKIDMSSYETKTNRTQLANAYSDSDPLVYLMKIKEDIELVAISSIKKVLIFNTEQ
INSKTTRNSQGVQVLKSKNSSVLAEIKLIEEIQYQDPDYYRGNIPAVGTFLKKEDEEKQS
QQLQFLLEE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacattaaaaaattaaatgttatcgatacaatagaaacaaactatatgcct
tattctatgtctgtaattgtatctagagcgctgcctgaaattgatggattgaaaccctca
catagaaagctgctctatacgatgtataaaatggggctgctgaaaggacagaaaaccaaa
tctgcaaacattgttggtcagaccatgcgcctcaatccacatagtgatatggccatctat
gaaactatggtgcggctcacaaggggcaatgaaacgctgctgcatccctatgtcgatagt
aaaggaaacttcggaaaaaactattcaagagatatggcttttgctgcgccaagatataca
gaggcaaaattagactctatctgtgaagaattcttcaacgagattggaaatgacactgtg
gattttgttccaaattatgataatactatgcaggagcctactttgctgcctacaaccttc
cctaatatcctagtcaatcctaatttagggattgcagtaggaatggcaagcagtatctgt
agttttaacttaagagaactgtgtgataccactgtcagacttcttgaagatgaaggcatt
gatgttatcgaatatttgaaagcacctgatttttcttccggcggagaattgatttataac
caaaaagatatgagaaaaatatatgaagaaggaagaggcactttctatttaagaggaaaa
taccgatatgataaagccaacagctgtattgatatttacgagataccctatacgaccaat
gcagaaacgatcatagaccaagttactgagctggtaaaggcaggaacgatcaaggaaatt
actgatgtacgggatgaaaccgataaaaacggactaaaaatcacattggatattaagaag
tcggcagatgttgagcagcttatgctaaagatatttaaatataccaagcttcaggatagc
tttagctgcaactttaacatcttagtcaacggacatccgagagtattaggtgtaaaagcc
atattattagaatggatagattttcgagtcggctgcatcaaaagaggcttgcgttatgat
attgaaagaaagacggagaaattacatttattaagaggattagagaaaatccttctggat
ttagataaggcagtacagatcgtaagagatacaaaaaaagataaagaggtaataccaaat
ctcatgaagggatttgaagtagatgcggcgcaggctgaatttattgcagaaattaagctg
aggaacttcaaccaagaatatattcttatgaagacaaaggatatcaaagacttggaaaag
gaactaaaaaaccttgaagaaacattgaatagcgaaaaaaaaatgaagaaaattattata
aagcagcttgacgcagtatcaaagaaatatggccaggatagaaaaacggatattgtggag
gaacaccatattgaagagataagtcctgaagatcttattgaagattataatataaagctg
tttcttaccaaagaaggatatctaaagaaaatccctttgattagcctgagaggaagcaat
ggacataagcttaaggaaggggatacgatcattcaggaaattgacggaaccaataaatca
gatttattgttttttaccaataagcataccgtatataaaaagaaagtatatgagttggag
gactgtaaaaccagcaacttaggagactatctgccaaatctgttagcccttgaagaaaag
gaagaaattatttatatggcggcaactgctgactacagtggctatatgctgtttttcttt
aaaaatggaaaatgtgccaagattgacatgtctagctatgagacgaaaacgaaccggaca
cagctggccaatgcttattccgacagcgatccattagtatatttgatgaagattaaagag
gatatagagctcgttgcgatcagcagcatcaagaaagttttgatttttaatacagagcaa
atcaattccaaaactacaagaaattcacaaggcgttcaagtactaaaatcgaagaacagc
agtgtcttagcagaaatcaagctgatagaggagattcagtatcaagatccggattattat
agagggaatatcccggctgttgggacttttttgaagaaagaagatgaagaaaaacagagt
caacagcttcagtttctattagaagaatag
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