KEGG   Geosporobacter ferrireducens: Gferi_09400
Entry
Gferi_09400       CDS       T04493                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gfe  Geosporobacter ferrireducens
Pathway
gfe03410  Base excision repair
gfe03430  Mismatch repair
gfe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gfe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Gferi_09400
   03430 Mismatch repair
    Gferi_09400
   03440 Homologous recombination
    Gferi_09400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfe03400]
    Gferi_09400
DNA repair and recombination proteins [BR:gfe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Gferi_09400
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Gferi_09400
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Gferi_09400
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 DUF34_NIF3
Other DBs
NCBI-ProteinID: AOT69781
UniProt: A0A1D8GFT9
LinkDB
Position
1940792..1942510
AA seq 572 aa
MVETLWKFHDIDSKFIPLQNGINPIVQKVLFYKGITEAAEMEEFLSPKPKKTYNPFLMRN
MEEASALILQYIREKKNIWIYGDYDVDGVASIALLMDFLSRFTDHLHYYIPLRAEEGYGL
NCDAIQEIKNNGADLIITVDCGSTSVKEVALAKSLGMEIIITDHHNLSEEKPDCLILNPK
QEDCPYPFKLLCGCGIAFKLAQALQKKLDAPKTCLNEILDLVALATVADVVPLIDENRTM
LKYGLQRMTHTTRHGLNFLIQSIGLGGKKITAYHIGYILGPHFNASGRIDDARAGVELLL
AKEPDKIVALTQHLIACNDERKLIQDQGLELCRERVEKEYQDDLFLVVDSGITHEGVIGI
IAGRIRDIYYKPTLVVTEAAEEGILKGSGRSIEGLDIYEELKKCADLFLKFGGHKNACGF
SIEKDKLNLLRQRLNLQAREIIENTPDIFRKSLKIYGIVTPPEITEKLVEDLERIEPYGM
GNEKPLFLIPNLKAPAPSDLLFMGKSKEHIKLRGISGNKGTMDAIGFGLADFYINHLNNP
AALDLLGFPCFNEWNGHKSIQFMISDMKRSSL
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggttgaaaccctatggaaatttcatgatatagattcaaaatttattcctctacaaaat
ggtataaaccctatcgtacaaaaagtactattttacaagggaatcactgaagctgcagag
atggaggaatttctttcaccgaagcctaaaaaaacctataatccattcttaatgagaaat
atggaagaagcttcagcactaatccttcaatatattcgcgaaaaaaagaacatctggatt
tatggtgattatgacgtagacggtgtagcgagcatcgctttattgatggactttttaagt
cgttttacagatcatcttcattactacattcccttgagagcagaggaaggctacggccta
aactgcgacgccattcaggaaattaaaaataatggagctgatttgattatcacggtagat
tgtggatctacttccgttaaagaagtagctttagccaaatccctggggatggaaatcatc
atcacagatcaccataacctttcagaggaaaagccagactgtttgattctcaatcccaaa
caggaggactgtccatatcccttcaagcttctctgcggctgtggcattgcttttaagctc
gcccaagcattgcagaaaaaactggatgcccctaaaacctgtctgaatgagatcttggac
ttagtggctctggctacagtagccgatgttgttccactgatcgacgaaaaccgtaccatg
ctgaaatacggcctacagcgaatgacccatacgacccgtcatggactaaactttttgatc
caatccattggcctcggtggaaaaaaaatcaccgcctatcatattggatatatcctaggg
cctcattttaatgccagcggaagaattgatgatgcacgggcaggagtagagctgcttctt
gctaaggaaccggataaaattgtggctcttacccagcacctgatcgcctgcaatgacgaa
cggaagctgatacaagatcaaggactggaactgtgccgtgaaagggttgaaaaagaatat
caagatgacctgtttttagtagtagattccggcattacccatgagggtgtcatcggtatt
attgctggaagaatccgggatatttattataaaccaacgcttgtagtcactgaagccgct
gaagaaggaattttaaagggaagtggccgcagtattgaagggttggatatttatgaagaa
ttaaaaaagtgtgcagatctctttctgaagtttggcggtcataagaatgcctgtggattt
tctatagagaaagataaattaaatctgcttcgccagcggctgaatctgcaggcccgggaa
atcatagaaaatacgccggatatttttaggaaatcattaaaaatttatggtattgtaacg
ccgccggagatcacagaaaaactggtcgaggatttagaacgcatagagccttatggcatg
ggtaatgaaaagcctcttttcctgatacccaatctaaaagctcctgcgccatctgatctt
ttgttcatgggaaaatctaaagaacatatcaaattgagaggtatttctggaaataaagga
accatggatgcaattggcttcgggttggctgacttctatataaatcatttaaacaaccct
gccgcattggacctgctgggttttccctgcttcaatgaatggaatggtcataaaagcatt
caatttatgattagtgacatgaaaagaagcagtctataa

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