Geosporobacter ferrireducens: Gferi_10480
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Entry
Gferi_10480 CDS
T04493
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gferi_10480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_10480
Enzymes [BR:
gfe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Gferi_10480
DNA repair and recombination proteins [BR:
gfe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Gferi_10480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AOT69973
UniProt:
A0A1D8GGF3
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All DBs
Position
complement(2212024..2212926)
Genome browser
AA seq
300 aa
AA seq
DB search
MKYNIQQVKDAVVIKGVQDFELPHIFECGQCFRWWREDDGSYTMTAKGKVINLCRRENSL
IIHPTTLEEFHQVWYSYFDMDRDYGTIKKVLSENDPVMEKATAFGHGIRILRQDPWETLI
SFIISSNRGISMIQKSIEDLSLRYGTYIGEYRGRKYYDFPKPQALLNQTVEAIRLSKTGY
RAKYIVDAAAVAAENQIELYQVHNLSTENARKTLLRISGVGPKVADCILLFSMDKQDAFP
IDTWVKRVMEFFYVPQGIPLNQLQDYAGKRFGAYAGFAQQYLFYYARELGIGKGGQGRNF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatataacattcaacaggtcaaagatgctgtcgtaataaaaggtgttcaagatttt
gaattgcctcatatttttgagtgtgggcaatgctttcgttggtggcgggaagatgacggc
agctatacgatgactgcgaagggaaaagtgatcaatctctgtcgccgggaaaacagtctc
attatacatcctacaacccttgaagaatttcaccaggtatggtattcctattttgatatg
gatcgcgactatggaacaatcaaaaaagttttatcagagaatgatccggttatggagaaa
gccactgcttttggacatggtatccgtattttgcgacaggatccgtgggagacattgatc
tcttttattatttcttccaatcggggaatctcaatgattcaaaaatccatagaggattta
agtcttcgatatggcacctatatcggtgaatatagagggagaaaatactatgattttcct
aagccgcaggcattactaaatcagactgtagaagccattcgcctgtctaaaaccggttat
cgggcgaaatatattgtcgatgcagctgcagtggcagcagaaaatcaaatagagctgtat
caggtgcacaatctgtcgacggaaaatgctagaaaaacattgctgcggattagtggtgta
ggccctaaagtagccgactgtattttgttgttttctatggacaagcaagatgcttttccc
attgatacctgggtaaaaagagttatggagtttttctatgtgccccagggcatcccctta
aatcagctgcaagattatgcaggaaagcggtttggcgcttacgcaggttttgcgcagcaa
tacctgttttattatgcacgggaattaggcattggtaaaggaggacagggaaggaatttt
taa
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