Geosporobacter ferrireducens: Gferi_13155
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Entry
Gferi_13155 CDS
T04493
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gferi_13155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_13155
Enzymes [BR:
gfe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Gferi_13155
DNA repair and recombination proteins [BR:
gfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Gferi_13155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOT70444
UniProt:
A0A1D8GHR5
LinkDB
All DBs
Position
complement(2807228..2807785)
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AA seq
185 aa
AA seq
DB search
MYTLEILQQIVSQCRKCALHQGRNKTVFGVGNPSADILLVGEGPGQQEDQQGDPFVGPAG
QLLTKAIEGIGMNREKVYIANIVKCRPPGNRNPLKEEMESCIPYLRWQVKLIQPKIILCL
GAIAATNIIDQNFKITKQRGQWIEKKGIWLIATFHPSAVLRDEMKKRPFWEDFKELKRKY
DEILR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgtataccttagaaatattacagcagattgtgagccaatgcaggaaatgcgctctacat
cagggtagaaataaaactgtttttggggtaggaaatcccagtgcggatatactattggtg
ggagagggaccagggcagcaagaagatcagcagggagatccctttgtaggacctgcaggt
cagctgttgacaaaggctattgaaggaatcggtatgaatagagagaaggtatacattgct
aatattgttaaatgtagaccccctggcaaccgaaacccacttaaagaagagatggaaagc
tgcattccctatctccgatggcaggtaaaattgatacagcctaaaataatcctatgttta
ggcgctattgcagctacaaatatcattgatcaaaattttaagattacgaagcaaagaggg
cagtggattgaaaaaaaaggcatttggctgatcgctacttttcatccttcggcagtactt
agagacgaaatgaaaaaaaggcccttttgggaagattttaaagaattaaaaagaaaatat
gatgaaatattgagatag
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