Geosporobacter ferrireducens: Gferi_13290
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Entry
Gferi_13290 CDS
T04493
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
gfe
Geosporobacter ferrireducens
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfe03016
]
Gferi_13290
Transfer RNA biogenesis [BR:
gfe03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Gferi_13290
Prokaryotic type
Methyltransferases
Gferi_13290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Arf
MMR_HSR1_Xtn
Roc
Gtr1_RagA
Ras
PduV-EutP
AAA_15
cobW
AAA_29
AAA_16
DUF4985
Motif
Other DBs
NCBI-ProteinID:
AOT70466
UniProt:
A0A1D8GHU6
LinkDB
All DBs
Position
2831518..2832900
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AA seq
460 aa
AA seq
DB search
MIDDTIAAIGTAPGEAGIGIVRMSGPDAVAILDKLFVPTRGSSILEYAGRRLTHGHIVDP
DTKSRVDEVLVTYMKAPYTYTAEDVTEIDCHGGIVPVRKILELVLRHGARTAEPGEFTKR
AFLNGRIDLAQAEAVMDLIRAKTDVGFDVALGQLEGSLSKEVKVIRDKLLEMLAHITVNI
DFPDEDIEELTYRTLKEQAEGIEQNIEGLLKTAHAGKIIREGLSTVIIGKPNVGKSSLMN
ALLRESRAIVTDIPGTTRDVIEEYVNIQGIPLRIIDTAGIRETEDLIEKIGVERSKEFFN
RADLIIFVLNAAEPLSTEDEQIMQLVEHRDAIVLINKIDLPSKLEENKIKELLPGKRIIP
ISVLEEKGLHELEDAIVKMVYGGEVKHQDHSLVTNTRHKNALERGKRSMEDAIRAIDSGM
PLDFIEVDVKNTWDYLGEITGDTVGEDLIDKIFANFCLGK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatagatgataccattgctgccattggaacagccccgggagaagcgggtatagggatt
gttcgtatgagtggacctgatgcagtggccatattagataagctatttgtgcccaccagg
ggaagtagtatattggagtatgccggtagaagattaacccatggacatattgtagatcca
gatacaaaaagtagagtcgatgaagtactggttacctatatgaaggcaccttatacttat
acagcagaggatgtaacagagattgattgtcatggcggcattgttcctgtaagaaagata
ttagaattggtgctgagacatggggcaagaaccgctgaacctggtgaatttacgaaaaga
gcatttttaaacggtagaattgatttagctcaagcagaagcagtaatggatctaataagg
gctaaaaccgatgtaggttttgatgtagctttagggcaattggaaggaagtctgtcgaaa
gaggttaaggttattcgggacaagcttttggaaatgttggctcatataacagtaaatatt
gactttcctgatgaggatatagaggaacttacatatcgtactttaaaagaacaggctgaa
ggtattgaacaaaatatagaaggcctgttgaaaactgcccatgcgggaaaaataatacgt
gaaggccttagcactgtaattatcgggaagcctaatgttggaaaatcttccttaatgaat
gcactgctgcgggaatcgagagcgattgttaccgatattccaggtactaccagagatgta
attgaagagtatgtaaatatacaaggaattccattaagaattattgatactgcaggaata
agggaaacagaggacctaatcgaaaaaatcggagtagagagaagtaaagaatttttcaac
cgtgcagacctaattatttttgtactcaatgcagcagagccgctatctacagaggatgaa
caaatcatgcagctggttgagcaccgggatgccattgttctgatcaataaaatagacctg
ccttcaaagttggaagagaataagattaaagaactgctgccgggaaaaaggattattccc
atatctgtattagaagaaaagggtcttcatgagctggaagatgctattgttaaaatggtc
tatggtggggaagtgaagcatcaggatcattctcttgtaaccaatacacgccataaaaat
gcattagagcgcgggaaaagaagcatggaggatgcgattagagctatcgatagtggcatg
cccttagactttatcgaagtggatgtaaagaatacgtgggattatttaggtgaaataaca
ggagatacagtaggtgaagatttgattgataaaatatttgccaacttctgtttaggaaaa
taa
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