Geosporobacter ferrireducens: Gferi_15760
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Entry
Gferi_15760 CDS
T04493
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gfe
Geosporobacter ferrireducens
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfe03016
]
Gferi_15760
Enzymes [BR:
gfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Gferi_15760
Transfer RNA biogenesis [BR:
gfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Gferi_15760
Prokaryotic type
Gferi_15760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AOT70885
UniProt:
A0A1D8GIY8
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All DBs
Position
3371040..3371777
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AA seq
245 aa
AA seq
DB search
MRNIRLLIEYDGTKYNGWQRLGNTENTIQHKLENVLSLMSEEKIEIIGSGRTDAGVHALG
QVANFHTRSALNTREILDYCNQYLPQDIVVKRVQEAEERFHARYNATSKKYMYRIWNSNI
PTAFYRKYSYHVPGPLSIEKMRKASSYFIGNHDFQAFSSMKSKKKSTEREIYAIEIIKER
ERIDIFFHGNGFLHNMVRIITGTLIEIGQGKRKAEEIPIILEGRIREKAGVTAPAQGLFL
YEVYY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatatacgattgcttatagaatatgatggtacaaaatataatggttggcagaga
ttgggaaacacagaaaataccattcagcataagctggaaaatgtactgagcctcatgtcg
gaggaaaagatcgaaatcattggttcgggaagaaccgatgcaggagttcatgccttaggg
caagtggctaactttcatacccgcagcgctttaaacacaagggagatcctggattattgc
aatcaatatcttccccaggatatcgtagtaaaaagagtacaggaggctgaggaacggttt
catgcccgctataatgccaccagtaagaagtatatgtaccgaatttggaacagcaatata
cctacagctttttaccgaaaatattcttatcatgtaccaggaccgctcagtatagaaaag
atgcgcaaggcatcctcctattttattggaaatcatgattttcaagccttttcttctatg
aaatctaagaaaaaatctacagagagggagatttatgctatagaaatcattaaagaaaga
gaacgaatagatattttctttcatggaaatggatttttgcataatatggttcggattatt
acaggaacgctgatagagatagggcagggaaaaagaaaagcagaagaaattcctattatt
ctggaaggcaggatacgggaaaaggcaggggtaacggcacctgcccagggattgtttctc
tatgaggtatattattaa
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