Geosporobacter ferrireducens: Gferi_17135
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Entry
Gferi_17135 CDS
T04493
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gfe
Geosporobacter ferrireducens
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_17135
DNA repair and recombination proteins [BR:
gfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Gferi_17135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
Lon_C
AAA_22
AAA_16
GvpD_P-loop
AAA
ABC_tran
Rad51
AAA_11
NTPase_1
nSTAND3
RecA
NACHT
AAA_14
AAA_29
SLFN-g3_helicase
AAA_5
AAA_24
ATP-synt_ab
ATPase_2
Isochorismatase
RsgA_GTPase
Zn_ribbon_RPB9
DAP3
Motif
Other DBs
NCBI-ProteinID:
AOT71122
UniProt:
A0A1D8GJU3
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Position
3667492..3668880
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AA seq
462 aa
AA seq
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MAKKVKSVFVCQSCGYESPKWMGQCVCGAWNSMVEELEASSSAIYKKSATITSSVKPQPI
KEIKSGSYDRLDTHIGELNRVLGGGLVQGSLTLISGEPGIGKSTLILQVSSVIAEKYGTV
LYVSGEESEEQIKMRAERLNALSDRLLVVSETNVEVIEGYIQEFNPGFIIIDSIQTLFKP
ELTSAPGSVSQVRECANHIMHIAKTKNIPVFIVAHVTKTGELAGPRILEHLVDTVLHFNG
ERSQEFRVIRALKNRFGTTSEIGVFEMKEEGLIEVANPSEMFLEGLTPDVDGAMVIGGLE
GSRPLLLEIQALVAPTSLGFARRTAIGVDVNRLNLIIAVLEKKVGLPLTNQDVYVNVVGG
LKLEGTSADLGLALTIFSSMRGLPIPTTTTLAIGEISLTGELRPVANAEKIVKEAAKMGF
SKCILPAKNLKKLQIQEPIQLIGAHFLKDAIESMFFSKEHPF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaagtaaaaagcgtttttgtgtgtcaaagctgcggttacgaaagtccaaaa
tggatgggacaatgcgtttgtggggcttggaattctatggtagaagaattagaggccagc
agcagtgcaatttataaaaaatcagcaaccataaccagttctgtcaaaccacaacctatt
aaggaaatcaaatcgggctcttatgatcgtttagatacgcatataggagagctcaaccgg
gtgttgggaggtggattggtccagggttcattgacgctgatatcgggagagcctggaatt
ggaaaatccacattgatcctccaagtcagcagcgttattgcagagaaatacggaacagta
ctctatgtgtccggagaggaatccgaagaacaaatcaaaatgcgggcagagcggctgaat
gccctttctgaccgactgttggttgtatcggaaaccaatgtagaggttattgaggggtac
atacaggagtttaaccctggatttatcattatagactctattcaaaccctatttaagcca
gaattgacatcagcaccgggaagtgtttcgcaagtccgtgaatgtgccaatcatattatg
cacattgcaaagacaaaaaacattcccgtgtttattgtagcccatgtaacaaaaactgga
gagctggcagggccaagaatactagagcacttagtagatacagtacttcattttaatggg
gaaagaagccaagaatttcgcgtgatccgtgcgctcaaaaaccgttttggaacgaccagt
gaaatcggtgtttttgaaatgaaggaagaaggcctgattgaggtagccaatccatcagaa
atgtttctagaaggccttacaccggatgtggatggtgcgatggtgattggcggattagaa
gggagcaggccattgcttcttgagattcaagccctggtagcaccgaccagtttaggattt
gcaaggcggacggcaattggtgtagatgtaaatcgcctgaatctaattattgcagtatta
gagaaaaaagtaggactccctttaaccaatcaagatgtatatgtaaatgtggtaggcgga
ttaaaactggaaggaacctctgcggacttagggctggctttaaccatattttccagcatg
agaggacttccgattccgactaccactacccttgctattggagaaatcagtctaacggga
gagttaagacctgtagctaatgcggagaaaattgtgaaagaagctgcaaaaatgggtttt
tcaaaatgcatattgccggctaagaatttaaagaagctccagattcaggagcctattcaa
ctgataggagctcattttctgaaggatgctatagaaagtatgtttttcagtaaggagcac
cctttttag
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