Geosporobacter ferrireducens: Gferi_20080
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Entry
Gferi_20080 CDS
T04493
Name
(GenBank) ABC transporter
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Gferi_20080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfe02000
]
Gferi_20080
Transporters [BR:
gfe02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Gferi_20080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
RsgA_GTPase
DEAD
AAA_16
IstB_IS21
RuvX
AAA_30
ABC_ATPase
nSTAND3
AAA_29
MMR_HSR1
AAA_19
AAA_24
NACHT
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AOT71630
UniProt:
A0A1D8GL52
LinkDB
All DBs
Position
4266222..4267994
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AA seq
590 aa
AA seq
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MDKNSKQLFKQLRLEGFHPLLNYLMPYRKGMSLSVLSGILHHLLGIIGPALGAYLVGVAV
IGGKKEQILPYLPILGILVTARIVMYYSDMWFAHEVAFRILVDFRIKLYNAIERVAPAYL
LKQRSGELAATLMADVEVLEWFFAHTAGAFLVAVAVPLITLGMMFTMHWILPLILLPFIF
ILFSIPFWFKKKADQQGVETRERLAAVHGEAIDGIQGLREIVSFNHKSGYTARLSRYSES
LYESLLAYGKRMGVEGAYLNGVSSLAMVSILVVSALLVVQGSLNKQWLPVIMILAANIFS
PILEVAAMGRNFSIILAAAKRVAAVLETEETVKDTGKIQLNKSNELKIAFHDVDFTYGKE
LPLVLNKASFQVNHGETVALVGESGVGKTTCINLLQRFWDVTGGKITIEGTDIRSLSLDS
LRSLITVVPQEIYLFNLSIRENIRMGNPKATDEEVEKAAKAAHIHEFIMGLPEGYDTNAG
ERGLKMSGGQRQRLAIARAFLKDSPILILDEALSSLDTENERLLQQSLNDLRKGKTTLIV
AHRLSTFKEADRLVVLQDGKVTETGNHTSLVQRKGYYYDLINAQIASVAV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaatagcaaacaactttttaagcagcttcgactggaaggctttcatccactg
ctgaactatttaatgccttataggaaaggcatgagcctctctgtattaagtggtattctg
catcatttattagggattattggtcctgcattaggggcctatttagttggggtggcagtg
attgggggtaaaaaggagcaaattcttccttacttgccgattctagggatattagtaaca
gcaagaattgttatgtattattcagatatgtggtttgcccatgaagtagcctttagaatt
ttagtagattttcggattaagctttataatgccattgagcgggtagctccggcttatctt
ttgaaacagcgttcaggagagcttgcagctacgcttatggcagatgttgaagtattagaa
tggttttttgcacatacagcaggggcttttttagtagctgtagctgttccgctcattacc
ttaggtatgatgtttaccatgcattggatactgccactcatactcttgccattcattttt
attctgtttagtattcctttttggtttaaaaagaaggcggaccaacagggtgttgagaca
agagaaagattggctgcagttcatggtgaagcgattgatggaatacaagggttgcgggag
attgtttcttttaatcataagtccggttatacggctagactatcaaggtactcagaaagc
ctttatgaaagtttactagcctatggaaaaagaatgggcgttgaaggggcttatcttaac
ggggtgagttccctggctatggttagtatattagttgtgtcggcattattggtagttcag
ggatctttgaacaaacaatggctgccagtaatcatgattcttgcagcgaatatttttagt
cctattttagaggttgctgccatgggcagaaacttcagtattattttagcggcggcaaag
cgggtagcagcggtactggaaacagaagaaaccgttaaagacacaggaaagattcagcta
aataaaagtaatgaactgaaaattgctttccacgatgtcgattttacatatggtaaagag
cttcctcttgttttaaataaagcttcctttcaagtaaatcatggagaaacagtcgcattg
gtaggagagtccggtgttgggaaaactacatgcattaatttgttgcagagattttgggat
gtgacaggcgggaaaattacaattgagggtacagatatcagaagcttaagcttagattct
ctgcgttccctcattaccgtagtacctcaggaaatctatctttttaatctatcgattcgt
gaaaatattcgaatgggaaaccctaaggccacagatgaagaagtagagaaggcggcaaaa
gcggcacatatccatgaatttattatgggacttccagagggatatgataccaatgcagga
gaacggggcttaaaaatgtccggagggcagagacaaagattagctattgcaagagctttt
ttaaaggattcaccaatccttatcctagatgaagcattgtccagcttagatacggaaaat
gaacggctgctccagcagtctttaaatgatttgcgtaaaggaaagaccacattgattgta
gcccacagactttctacctttaaagaagcagaccggttagtggtgctgcaggatggaaaa
gttacagaaacaggaaatcatacatcattagtgcaacgaaagggatattattatgattta
attaatgcacagatagcatctgttgctgtataa
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