Geosporobacter ferrireducens: Gferi_20315
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Entry
Gferi_20315 CDS
T04493
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gfe
Geosporobacter ferrireducens
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_20315
Enzymes [BR:
gfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gferi_20315
DNA repair and recombination proteins [BR:
gfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Gferi_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
PRESAN
Motif
Other DBs
NCBI-ProteinID:
AOT71673
UniProt:
A0A1D8GL92
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All DBs
Position
4318467..4321892
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AA seq
1141 aa
AA seq
DB search
MKIKYILGRAGCGKSHYILEDIKKALGETREALILIVPDQFTLQAERDLIEKMKLPGIMH
IQVLSFTRLAQLVFNEVGGTTRIHINDQGKQMIIRKIIDESEKELRVYKKAAQQEGFISK
FSELLCELKQQTILPQELMQEAFAMGEDSILRDKLSDIAYIYEQFNRYLEGKYLDTEDYI
SLLIEKLEAASFLRNSRIWIDGFHSFTVQTYQIIEKLMGIAQEVTVALTMPPKADERDGD
LFKISEQTYQKLHDLAVERGVVEEKICLESLSSNGRKKPAEMVHIEAELYAYPYSCYEAG
KVEQIKLFAGNNLHTEVENATAQILSLVRDQGYRWRDIALVSNDMENYGLLVERVFQEYG
IPYFLDQKKSIMNNSIIECILSALEIIRRGFRYEDVFRFFKAGFSGLSIEAYEQLENYVL
RYGIQGSRWMEEFTKGDEGPLKALNESRVKFIQPIKILEKKIKGKKTVEGITKGLYEYLV
DLGVDKQLEDWIDTLRAKGAYAYVLENAQLWNILMDTLDQMVEIIGEQSITLKEYIRILD
AGFSSLELAIIPTTIDQVLVGNIQRSKSHDIKALFVVGVNDGILPTGKGEEGILSDEEKR
YIKEKGLQLRSDHEGKACEEKFLIYSAFSKPGIYLWISYALADQEGKALRPSILIDRIKK
LFKGLSVESDIVYDEAKQVQLIGTQNSTFKYLIENLRKYVDGKPMADLWWDVYCWYYEQE
EWKFRREAVIDGFFHSNQESYLESQQAKQLYRLPIRSSVSRLEQFVNCPFAHFIKYGLKP
KERLTYKVQAPDIGELFHDSMKKFTEKLQEEDISWRELDRKQSDVVIDSIIDEMVPAYGE
GVLLSTHRYKYLVQRLKRISRRAVWTLTEHLKRGSFEPIGHEIGFGQGEVYPPIEVELPD
GEKIYLEGRIDRVDVYEDEAGSYMKIIDYKSGSKDFDLSEVYYGMQLQLMIYLDAMLTHH
KHPENKPVKPAGIFYFKIDDPMIKADERIVEAIEKEIRKKLKLKGLVLKDVHIIRQMDRE
IEGYSDIIPVSLGKNQDFHKWSSVLSHEGFHAVLKHVRNLVKEITNEMIKGNIRIEPCKN
GRHTACSFCSYQGICQFDSLLEDNRYKHIKKMKDEQVMNLLMLEEEVGEDGSMDGEPAAG
N
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaagtatatattgggaagagctggctgtggaaagagccattatatattagaa
gatataaaaaaggctttgggggagactcgggaagcattgattcttatcgttccggatcaa
tttactcttcaagcggagagagatctgattgagaaaatgaaactgccaggtattatgcat
atacaggtgcttagctttacccggctggctcagttggtttttaatgaggtaggtggaacg
actcgaatccatatcaatgaccaaggaaaacagatgatcattcgaaaaatcattgatgag
tcggaaaaagagctaagagtttataaaaaagctgcacagcaggaaggctttatcagtaaa
ttcagcgagctgctgtgtgaactgaagcaacagaccatcttaccccaggagttaatgcag
gaggcttttgccatgggcgaagacagtatcctgcgggacaagctttcagatattgcatac
atatatgaacaatttaaccggtatctggaaggaaagtatctggatacggaagattacata
agtttgttgattgagaaattggaagcagcgagttttttaagaaattcccgaatttggata
gatggttttcatagctttacggtacaaacctatcaaattattgaaaaactaatgggaatc
gctcaagaagttactgtagcgcttaccatgccgccgaaagccgatgaaagagatggagat
ttatttaagatctctgagcagacctatcaaaaacttcatgatttggcagtggagcgtgga
gtagtagaagaaaagatttgtttagaatcattaagtagcaatgggagaaagaagcctgct
gaaatggttcatatagaagcggagctttatgcttatccctacagttgctatgaagctgga
aaagtggaacagattaaactgtttgcaggaaataatcttcacacagaggttgaaaatgca
acagcgcagattttaagtcttgtaagggatcaaggctatcgctggagagacattgcactg
gtctctaatgatatggaaaactatggattattggtggaaagagtatttcaagaatacgga
atcccatactttttggatcagaaaaaatccatcatgaataattccattattgaatgtata
ctttccgcattggagattatccggagaggtttccggtatgaagatgtattccgctttttt
aaagcgggatttagcggactctctatagaggcatatgagcagttggaaaattatgtattg
cggtatggcattcagggaagccgatggatggaagaatttacaaagggagatgaaggcccg
ttaaaagccttaaatgagagtagggtaaaatttattcaacctattaaaattttagaaaaa
aagataaaaggtaaaaagacagtagaaggaattacgaaaggcctctatgaatacctggta
gacctaggcgtagacaaacaattggaagattggatcgacacactcagagccaagggagcc
tatgcctatgttttagagaatgcacagctgtggaatatattgatggatacccttgatcaa
atggtagaaatcataggggaacagtccattacgctgaaagaatatatccgcattttagat
gcgggcttttcttccttggagttagccattatacctacgaccattgatcaggtgttggtg
ggaaatattcagcgttccaaaagtcacgatattaaagccctctttgtagttggtgtaaac
gatggaattttgcccacaggcaaaggagaggagggaattctttcagacgaggaaaaacgc
tatattaaggaaaaaggattacaactgcgctccgatcatgaaggaaaggcctgtgaagag
aaatttctcatctattctgcttttagtaagcccggtatctacttatggatcagctacgct
ttagcagatcaggaaggaaaggctttgcgcccatctattctcatagatcgcattaagaag
ctatttaaagggctttcggtggagagcgatattgtctatgatgaagcgaagcaggtacaa
ctgattggaacacaaaacagtacttttaaatatctcattgagaatctgcgtaaatatgta
gatggaaaacctatggccgatttatggtgggatgtatactgctggtattatgagcaggag
gaatggaagttccgtagagaagctgttatagatggtttttttcacagcaatcaggaaagc
tatttagagtctcaacaggcaaagcagctctatcgcttaccgattcgctccagtgtttca
agactggaacagtttgtgaattgtccctttgcccactttatcaagtacggattgaagcca
aaggaaagattaacctataaggttcaggcaccggatattggtgagttatttcatgattcc
atgaagaaatttacggagaaattgcaggaagaggatatttcctggcgagagttggatcga
aagcaatcagatgtggttattgacagtattatcgatgagatggttcctgcttatggagaa
ggagtcttactcagtacccatcgctataaatatttagtacaacggttgaagcgaatcagc
aggagggctgtatggacccttacagagcatctgaagcggggcagtttcgagcctatcggc
catgaaataggttttggacagggggaagtctatccacccattgaagtagagttgcccgat
ggagaaaagatctatctggaggggcgcattgaccgggtagacgtctatgaggatgaagcg
ggaagctatatgaaaattattgattataaatccggcagtaaagactttgacctgtcagaa
gtatattacggaatgcagctgcaattaatgatttatttagatgccatgctgacccatcat
aagcatccggaaaataaaccggtaaaaccagcaggaatcttttatttcaagatagacgat
cccatgatcaaagcagacgaaaggattgttgaagctatcgaaaaagaaattcgaaaaaaa
ttgaagctaaagggtttagttttaaaggatgtgcatattatacggcaaatggatcgggag
attgaaggttattcagatatcattcctgtgtcattgggaaaaaatcaagatttccataaa
tggtcttctgtattatcccatgaagggtttcatgctgtattaaaacatgttcgcaatttg
gtaaaggaaataaccaatgaaatgataaaagggaatatccgtattgagccttgtaaaaat
ggaaggcatactgcctgcagcttttgttcctaccaaggaatttgtcaatttgacagtctg
ctggaggataaccgatataaacatataaagaagatgaaggatgaacaggttatgaattta
ctgatgctggaagaggaggtgggggaagatggttcaatggacggagagccagcagcaggc
aattga
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