Geosporobacter ferrireducens: Gferi_20320
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Entry
Gferi_20320 CDS
T04493
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gfe
Geosporobacter ferrireducens
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_20320
Enzymes [BR:
gfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gferi_20320
DNA repair and recombination proteins [BR:
gfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Gferi_20320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
DEAD
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOT71674
UniProt:
A0A1D8GL88
LinkDB
All DBs
Position
4321855..4325460
Genome browser
AA seq
1201 aa
AA seq
DB search
MVQWTESQQQAIDARNSNLLVAAAAGSGKTAVLVERIIQMILKDKIDLDSLLIVTFTNAA
AGEMRERIAAAILKELEKKNENEVHLRRQMNLLSRASISTLHAFCIEVARKYFHMIDIDP
NFRIGDGTETGIMKLEVVEELFESEYEKSTDEFLGLVERFGDTKQDLPLQDIVLRLYDFI
QSKPDPLLWLKERIEDFRMDLAEFEKSPWYGAIAEQIDIELKGALDSFEEAKSLCERECG
PRGYREAIVEDIQLTEALQKDLKKGMKSFYNQISMLDHKRLGKLDKNVDEGLKEEVKTLR
DKGKKILQDIQKGLFGKNPEAAIEDLHALYPYMRYLYQLICAFDESYQEKKKEKGIVDFN
DLEHYALAILKHESAAQAYRNKFAYIFVDEYQDSNIVQETLIGFIKRENNLFLVGDVKQS
IYRFRLADPSLFIEKYETYTNEVNVGDRRIDLSQNFRSREEILEGVNGIFRQIMSKAFGE
IDYDDKACLYKGADREDPVGTPLELILIEKKEIEEELSSDEKEEIELLEEQEILEDTALE
AKIAAQKIKELLQGEIYDPKMDCYRPVTYRDIVILLRTTKNWADTFQEVFMAEGIPAYAD
VNAGYFETIEVNIFIHLLQLIDNKQQDIPLLSVMRSPIGGFKTEDLISIRLHNKSETFYN
AVETYCMEENNELADRLKKFIGQINGWKEESRYINMDTFIWKLLMETGYYHYVGAMPGGM
QRQANLRILFDRARQFQKTSIRGLFNFIRFIDKLKSSSGDMGTAKILGENDNLVRIMSIH
KSKGLEFPIVMVAGMGKQFNLMDTNQQILFHKDLGIGSKYADPELRHYSDTIVKVAMKNK
IRLESLSEEMRILYVALTRPKDKLVLIGAVKELEKAAKRWMRPLNPYHLSKGKSYLDWIG
SVLIRHRDGCILRDLARIPENDASCRTDEGQWVIHTVRRQDTRQEQTEQKEIKQKMLQYL
KNFQREEASLYRDMIYQRLNWFYENQVASQIPSKLSVTEIKRLTIRDRNPLGFFIPPLQK
MPGFMEGKKQFSAVEKGTIIHFVMQHLRFQDLDQKERIQEQVEDMVARELLTPEEAAVVD
IDKIFAFFQSSIGKRILSAKYIFRETAFNYMKPAQQLNIGLENCDEGLLVQGVIDCYFEE
DEAYVLVDYKTDIIGMEGKEEILEKYRVQIELYKEALEKISGKSVRESYLYLFHLDEAVK
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggttcaatggacggagagccagcagcaggcaattgatgcaagaaacagcaatttattg
gtagctgcagcagcgggttcggggaaaaccgcggttctggtggagcgaattatacaaatg
atcctaaaggataaaattgatctagactctttattgattgtaacctttacaaatgcagca
gcaggggaaatgcgtgaaagaattgctgcagcaattttaaaagagttggaaaagaaaaat
gagaatgaagtccatctgcggcggcaaatgaatctattgagtcgtgcttccattagtaca
ctgcacgccttttgcatagaagtggcgcgaaagtatttccatatgatcgacatagatccc
aatttccgtattggagacggcacagagactggaattatgaaactagaagtcgtagaagaa
ctttttgaaagtgagtatgagaagagcacagatgaatttttaggacttgtagaacgcttt
ggggacacgaaacaggatcttcctttgcaggatattgtgctgcggctctatgattttata
cagagtaaacccgatcccctattgtggttgaaggaaagaatagaagattttcgtatggat
ctggcagaatttgagaagagtccatggtatggtgcgattgcagaacagatagatattgaa
ttaaagggtgcactagacagctttgaagaggcaaagagtctgtgtgaaagagaatgtggg
ccaagaggctatcgtgaagccattgttgaggacattcaattgacagaagctttacaaaaa
gatctaaaaaaaggcatgaagtctttttataatcaaatcagcatgctcgatcataaacga
ttgggaaagttggataaaaacgttgatgaaggcctgaaagaggaggtgaaaaccctacgg
gataaagggaaaaaaatattgcaggatatacaaaaaggcctatttggaaagaatcctgaa
gccgctattgaagacttgcatgcactatatccctatatgcgatacctttatcaattgatt
tgtgcttttgacgaaagttatcaagagaagaaaaaagaaaagggtattgtagatttcaat
gatttagagcattatgcattggccattttaaagcatgaatcggctgcacaagcctatcgg
aataaattcgcctatatctttgtggatgaatatcaggacagtaatattgttcaagagacc
ttgattggtttcatcaagcgagaaaacaatctatttttggtaggagatgtgaagcaaagc
atttatcgttttcgtctggctgacccttccctatttattgaaaaatatgaaacctataca
aatgaagtaaacgttggggacagaagaatcgacttaagtcagaacttccgcagcagagag
gaaattcttgaaggggtgaatggtatcttcagacagattatgtctaaggcctttggtgaa
attgattatgatgacaaagcctgtctgtataaaggtgctgatagggaggaccctgttgga
acgccgctggaattaattttgatcgaaaaaaaggagatagaagaagagctatctagcgat
gaaaaagaggaaatagaactgttagaagagcaagagatcctggaagatacagcccttgaa
gcaaaaattgctgcccagaaaattaaagagctgctgcagggcgagatttatgaccccaaa
atggattgctatcggcctgttacctatagagatattgtaatattgcttcgaacgacaaaa
aactgggcagatacttttcaagaagtttttatggcagagggtattcccgcctatgccgat
gtgaatgcaggatactttgaaacgatagaagtaaatatttttatccatcttctacagttg
atcgacaacaagcagcaggatatacccctactgagtgttatgcgttcacctattggcgga
ttcaaaacagaggatcttatcagcattcgactacataacaagtcagagactttttataat
gcagttgaaacctattgtatggaagaaaataatgaattagcagaccgcttaaaaaaattt
atcgggcaaattaatgggtggaaagaggaatcccgatacattaacatggatacctttatc
tggaagctgctaatggaaacgggttactatcattatgttggagccatgcccggcggaatg
cagcggcaggcaaatcttcgcatattatttgacagggcaaggcagttccaaaaaacttcc
attcggggattgtttaattttatacggtttattgataaattgaaaagcagcagtggggat
atggggacagccaagatcctgggagaaaatgataacctggttcgaattatgagtatacat
aagagtaagggacttgaatttccaatcgtgatggtagccgggatgggaaagcagtttaat
ttaatggatacaaaccagcagatactttttcataaggatttgggaattggctctaaatat
gcagatcctgaactgcgccactacagtgatacgatcgtgaaggttgctatgaagaataaa
atcaggcttgaaagtctgtcagaggagatgcgcattctatatgtagccctcaccagacct
aaggacaaactggttctaataggtgctgtcaaagaactggaaaaggcggcaaagcgatgg
atgagacccctaaacccctatcatctaagcaagggaaaaagctatttggactggattggc
tctgtattgattcgtcaccgggatggctgcatactgcgggatctagcccggattccagag
aatgatgcttcttgtcgcacagatgagggtcaatgggtgattcatacggttagacggcaa
gatacaagacaagaacagacagagcagaaagaaataaaacaaaaaatgcttcagtatttg
aaaaattttcaacgagaggaagcttccctgtatcgggatatgatttatcagcgattaaac
tggttttatgaaaaccaagtagcctctcagattccttcgaagctttctgttacggaaatc
aagagacttacgatcagggacagaaatccattgggcttttttattccgccgctacagaaa
atgcctggctttatggaaggaaaaaagcagttctctgctgtagagaaaggaaccatcata
cattttgtaatgcagcatttacggtttcaggacctagatcaaaaagagcgtattcaagag
caagtggaggatatggtagcaagagaactgctgacaccggaagaagcggcagttgttgac
attgataaaatcttcgctttctttcaaagcagcattggaaagagaattctaagcgccaag
tatatctttcgggagacagcctttaactatatgaaacctgctcagcagttgaatattggc
ctggagaactgtgatgagggattgttggtgcagggagttatcgactgctattttgaagag
gatgaagcctatgtattggtagattataaaactgatatcatcggtatggaaggaaaagaa
gaaatacttgaaaagtaccgggtacaaattgaattgtataaagaggcattggagaaaatt
tccgggaaaagtgtaagagaaagctatttgtacctatttcatttagatgaggcggtgaag
ctatga
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