Geosporobacter ferrireducens: Gferi_20330
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Entry
Gferi_20330 CDS
T04493
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gfe
Geosporobacter ferrireducens
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_20330
DNA repair and recombination proteins [BR:
gfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Gferi_20330
Archaeal homologous recombinant proteins
Gferi_20330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
nSTAND3
AAA_21
AAA_19
AAA_16
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AOT71676
UniProt:
A0A1D8GL94
LinkDB
All DBs
Position
4326608..4329667
Genome browser
AA seq
1019 aa
AA seq
DB search
MKPLKLTMSAFGPYAGFQTLDFTELRERNIFLIHGPTGSGKTTILDGICFALYGDTSGAE
RSGRSMRSHHAGVEQMTEVTFEFALKEEQYRVHRKPEQERLKKSGTGTTVQMAEAILWKI
DPSNTAEESLVETGWKNVTDAIEKLIGFKSSQFRQVIMLPQGQFRKLLMADSVERQDIME
KLFQTEMYRKIEELLKKSAKELRDSIKEMENQRNWNLKKVECETSAALCQMIDSDEAELI
KLGESHKEKNDRVLAAQEALVAGKAGNEKLIELENSQKALKLLQDQKLSITKQEEVLKGA
RRAAALEEREKLTKQRSDDKIALEKKLAVCEKETEEAVRALEQAEKLLHKEQGQGEIREK
AKAHLIQLESYRQKVASLEAVKQQVAEQRKLVKQLEDQKEKLLIELVKMEESLNKQKQNS
DYMKEAAGKVPLLEAQYKEIEKKYSQKKQLEEIEKLAAVQQKDYIRCKEEFKGLDKKYLE
HKNEWLRLQEAWNKGQASILAAHLRANEACPVCGSTHHPKLAEKMEGVPSEEQLKNSALD
LEKLEVLREKSRQRLQQALIEVEKLENKRNLLRKELEDPSLGDAAYLEEVLTKRKEALEK
VQKELENLAETDKLLQTLEENVKTKKAILEDLLQNLKLQSESLRSIEGVYQEREASIPEE
IRSEEALEKELKKTKGFYDQLRLALEAAEKNYQDKATKLAAIKASKESLEKSYEETVAKY
TEEKRQFSEKMKQEGFQKYADYIEAKKSEIQQQQIEEEIKQYNSRLGAAEERFARAVKAA
ERITTVDLEQLQQALIAAQKEKDNALTLENNLRKKIENDRKAMEEIRSLESTIQAKEESY
KVVGYLSQVSNGENIHGLTLQRFVLGALLDDITIAATERLKRMSKGRYHLQRTLDRSRKN
AAGGLELEVFDTYTGIERPVTTLSGGESFLASLSLALGLADVVQSYSGGISLDTIFVDEG
FGTLDPESLDFALKALIDLQQGGRLVGIISHVPELRERIDARLEVSVGEKGSFASFKIS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattaaaattgaccatgagtgccttcggtccctatgccggatttcaaactttg
gattttacagaattgagagaacgtaatattttcttgatacacggccctacgggttcggga
aagacaaccattcttgacggtatttgctttgcgttgtatggcgataccagcggagcggaa
agaagcgggaggagtatgcgaagtcatcatgcaggcgtggaacagatgactgaggtaacc
tttgaatttgcactgaaggaagaacaatatagagtccatcggaagcctgaacaagaaagg
ttgaagaaatcagggacgggaactacggtccaaatggctgaggcaatactgtggaagata
gatccttctaatacggcagaagaaagcttggtggaaaccggctggaaaaatgttaccgat
gccattgaaaaactaattggctttaagagcagccaatttcgccaagtaatcatgctgccc
caagggcaatttcgaaagcttttgatggctgattccgtggagcggcaggatattatggaa
aagctttttcaaacagaaatgtatagaaaaattgaggagttattaaagaagtccgccaaa
gaattgcgggacagcatcaaagaaatggagaaccagcgaaattggaatctaaagaaagta
gaatgtgaaacttctgcagcactttgccaaatgattgattccgatgaagcagagttgata
aagttgggagagagtcataaggaaaaaaatgatcgcgttttagcggcgcaggaagcctta
gttgcaggaaaggcaggaaatgaaaagctgatagaactggaaaacagccaaaaagcgttg
aaactgctgcaagatcagaagctatccattaccaaacaggaagaggtcctcaaaggtgcc
agacgtgcagctgcattggaagagcgggaaaagctgacaaagcagcgaagcgatgataag
attgctttagaaaagaaactggctgtgtgtgagaaagaaaccgaagaggctgttcgtgct
ttagagcaggcagaaaagctgctgcataaagagcaagggcaaggagaaattcgtgaaaag
gcaaaagcccatttaattcagctggaaagttatcgccaaaaggtagcatccttagaagct
gtaaagcaacaggtagctgaacagaggaagctggtaaaacagttagaggatcaaaaagaa
aaacttctaatagaacttgttaagatggaagaaagccttaacaaacagaaacaaaacagt
gactacatgaaggaagctgctggaaaagtacctctgttggaagcgcaatataaggaaata
gaaaagaagtattctcaaaaaaagcaactggaggaaatagagaaactggctgctgtgcaa
caaaaggattatatccgatgtaaggaagaattcaaagggctggataaaaaatatttggaa
cataaaaatgaatggctgcggcttcaagaagcatggaacaaaggacaagcctctatcctt
gcagcacaccttcgagcaaacgaagcatgtcccgtatgcggttcaacccatcatcccaaa
ttggctgaaaaaatggaaggcgtaccttctgaggaacagttaaagaatagcgcattagat
ttagaaaagttggaagtgttgagggagaaaagcaggcagagacttcagcaagcattgata
gaagtagaaaagctggagaataaacggaatcttctacgcaaagaattggaggatccttct
ctaggggatgcagcttatctggaagaagtgctgacaaaaagaaaagaagctttggagaag
gttcaaaaagagctggaaaatttagcagaaacagataaacttttacagacattagaggaa
aatgtcaaaaccaaaaaagccatactggaggacctgcttcaaaaccttaagctacagagt
gaaagtcttcgcagtattgagggagtttatcaggagagagaggcttccataccggaggag
atacggtctgaggaggcattagaaaaagaactgaaaaaaacaaagggattctatgaccag
ttaagattggcccttgaagctgctgaaaaaaactatcaggataaggcgacaaagttagct
gcaataaaagcctccaaggagagcttagaaaagtcttatgaagaaactgtggcaaaatac
acagaagaaaaaaggcagttttctgaaaaaatgaagcaggaaggatttcagaagtatgca
gactatatagaagccaaaaaaagtgagatacagcaacaacagatcgaagaggaaataaag
cagtataacagtaggctgggggcggcagaagaacgcttcgcacgggcagtaaaagccgca
gagaggattacaactgttgatctggaacagcttcagcaggcattgattgctgcccaaaaa
gaaaaggataacgctttaacattagagaataatttgcgaaagaaaatagaaaatgaccgt
aaggcaatggaagagataaggtcactggaaagtacaattcaagcgaaagaagaatcctat
aaggttgtaggatatctctcccaggttagtaatggggaaaatatccatggacttacactg
cagcgctttgtgttaggtgcattgttggatgatatcaccatcgcagccacagaacgattg
aaacgaatgagcaagggccggtatcacttacaaaggactctggaccggtctagaaaaaat
gctgcagggggattagaattggaagtatttgatacctatacaggtattgaaagacctgtc
actacactatcggggggagagagctttttggcatcactttccttggctttaggcctggca
gatgtggtacaatcctattcagggggaattagtttagatacgatctttgttgacgaagga
tttggaactctagaccctgaatctttagattttgcattaaaagcccttatagatctgcag
caaggagggcggttggtggggattatatcccacgtgccagagttaagggaaagaatcgat
gcaaggctggaagtatccgttggagagaaagggagttttgcatcttttaaaatatcctaa
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