Geosporobacter ferrireducens: Gferi_20600
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Entry
Gferi_20600 CDS
T04493
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gferi_20600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_20600
Enzymes [BR:
gfe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Gferi_20600
DNA repair and recombination proteins [BR:
gfe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Gferi_20600
Prokaryotic type
Gferi_20600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
zf-C2H2_7
Motif
Other DBs
NCBI-ProteinID:
AOT71724
UniProt:
A0A1D8GLE0
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All DBs
Position
4381178..4382275
Genome browser
AA seq
365 aa
AA seq
DB search
MSAYKIDDWKDFRLEDVQRLQQHLIYWFERNHRKLPWRETRNPYYIWISEVMLQQTRVDT
VIPYFLRFIDAFPMIESLAAAEEEEVLQLWAGLGYYSRARNIHRGAKFICEIYNGKIPEA
RKELLKVHGIGPYTAGAILSIAYGKAAAAVDGNVMRVFSRLFLIYEDISEAGTRKMMERL
GETVVSVENPSAFNQGLMELGAMICTPSSPKCLLCPLLLICKARKEGVQETLPLKKKKEP
VKLLNMELALLQKEDKILLTKRPAEGLLANLWALPSTEEMIGNAPGKSIVMELQENYGIK
TAQPQADIQKSHIFTHMKWNMQLFRLKLISMSDIDYPEIQWVSLNEIGKYAIPTAFLKVI
KEIKI
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttataaaatagatgattggaaagattttaggttagaggacgtgcaaaggctg
caacagcatttaatttactggttcgaaagaaatcatcgaaaattaccctggagagaaaca
agaaatccttattatatctggatttcagaggtgatgctgcagcaaacccgggtggacaca
gtaatcccttattttttgcgtttcatcgatgcatttcctatgatagagagcctggcggca
gccgaagaagaggaagtgctgcagttatgggcaggcttgggatattactcaagagcaaga
aacatacaccggggtgcaaagttcatctgtgaaatttacaatggaaaaattccagaggct
cgaaaagagctgttgaaagttcatggaattggcccctatacagcaggcgcaatattgagt
attgcttatggaaaagcagcagcagcggtagatgggaatgttatgcgtgtgttttccaga
ttattcttaatctatgaagatattagcgaagccggtacgagaaagatgatggaaaggctt
ggggaaacagttgtttcggtagagaatccatctgcctttaatcaaggactaatggagctg
ggggccatgatatgtacgcctagttcacctaaatgcctcctttgtccccttctattgatc
tgcaaagctagaaaagagggtgtgcaggaaaccttgccgctgaagaaaaagaaggagcca
gttaagcttttaaatatggagttggcccttctgcaaaaagaagacaaaatattgctgaca
aagcgtcctgcagaaggtttattggcaaatctctgggcattgccatccactgaagaaatg
atagggaatgctcctggaaaaagcattgtaatggagttacaggagaactacgggataaaa
acagcccaacctcaggcagatatacagaaaagtcatatttttacccatatgaaatggaat
atgcagcttttcaggttaaagctcatatccatgtctgacattgactatccggaaattcaa
tgggtttctttgaatgaaatcggaaaatatgcgattcccactgcctttttaaaagtaatc
aaagagattaagatataa
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