Geosporobacter ferrireducens: Gferi_21615
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Entry
Gferi_21615 CDS
T04493
Name
(GenBank) modification methylase NmeDIP
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe00270
Cysteine and methionine metabolism
gfe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Gferi_21615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfe03000
]
Gferi_21615
03032 DNA replication proteins [BR:
gfe03032
]
Gferi_21615
03036 Chromosome and associated proteins [BR:
gfe03036
]
Gferi_21615
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gfe02048
]
Gferi_21615
Enzymes [BR:
gfe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Gferi_21615
Transcription factors [BR:
gfe03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Gferi_21615
DNA replication proteins [BR:
gfe03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Gferi_21615
Chromosome and associated proteins [BR:
gfe03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Gferi_21615
Prokaryotic defense system [BR:
gfe02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Gferi_21615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AOT71903
UniProt:
A0A1D8GLW4
LinkDB
All DBs
Position
complement(4614034..4615185)
Genome browser
AA seq
383 aa
AA seq
DB search
MEDLLKNKLKLLSFFSGAGFLDLGFEKSGYEILYVNEYHKPFLEAYKYSREKLKIQEPKY
GHHQVDICEILDSKSKGIIKELIKKEHSNSNFVGFIGGPPCPDFSVGGKNRGRHGDKGKL
SGTYIDLICRTLPDFFVFENVKGLWKTKKHREFFEELKYKAQSYGYVTTERLISSIEYGV
PQDRDRIIFIGFKKNFLLELGKELTEETVTIKNFPWEHDIAFSKENIAQLEWPDITPFYE
NSDLPLLNKNIPVILTVNHWFEKNDVNNHQNSEDFFQPKALKRFHSISEGDSSRKSFKRL
HRWRYSPTAAYGNNEVHLHPYKARRISVAEALAIQSLPRDFVLPENMTLTNKFKTIGNGV
PYLASKAIANTIKQYLQGNNVNY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaagatctactaaaaaacaaactaaaattactatcatttttctctggtgccggcttt
cttgacttgggttttgaaaaaagtggttacgaaattttatatgtgaatgaatatcataaa
ccatttttggaggcatataagtattcacgggaaaaattgaaaatacaagaacctaaatat
ggacatcatcaggtagatatatgtgagattcttgattcaaaatcgaaaggtattataaaa
gaattaattaaaaaagaacatagtaactcgaattttgtcggcttcataggtggaccgcct
tgcccagacttctccgtaggcggaaaaaatagggggcgtcatggtgataagggtaaactt
tccggtacatatatcgatttaatatgtcggacattgcctgatttttttgtatttgaaaat
gtgaaaggtttgtggaaaacaaaaaaacaccgggagttttttgaagaattaaaatataaa
gcccaatcttacggttatgtaacaacagaacgtttaatcagttcaattgaatatggagtt
cctcaagatagagataggataatttttatcggcttcaaaaagaatttccttcttgaatta
ggaaaggaacttactgaagaaactgtaactattaaaaatttcccttgggagcatgatatt
gctttttcaaaagaaaatatagcacagctggaatggcctgatataacccctttttatgag
aattctgacttgcctttattaaataaaaatattcctgttattctaactgtaaatcattgg
tttgaaaaaaatgatgtaaataaccatcaaaattctgaagatttctttcaacccaaggct
ttgaaacggtttcattcaattagtgaaggagattcatcccggaagtcttttaaaaggtta
catagatggcggtattcccccacagctgcatacggaaacaatgaagttcatttacatcca
tacaaggcaagacgaatatctgtagctgaagctttggcaatacaatcattgcctcgagac
tttgttttacctgaaaatatgacacttacgaacaaatttaagactatcggaaatggggtc
ccttaccttgcttctaaagcaattgctaatactattaaacaatacttacaaggaaataac
gtaaactattga
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