Geosporobacter ferrireducens: Gferi_22950
Help
Entry
Gferi_22950 CDS
T04493
Name
(GenBank) peptidoglycan-binding protein LysM
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
gfe
Geosporobacter ferrireducens
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfe01002
]
Gferi_22950
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gfe01011
]
Gferi_22950
Peptidases and inhibitors [BR:
gfe01002
]
Cysteine peptidases
Family C82
Gferi_22950
Peptidoglycan biosynthesis and degradation proteins [BR:
gfe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Gferi_22950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
YkuD
LysM2_NFP
LysM_RLK
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AOT72145
UniProt:
A0A1D8GMN2
LinkDB
All DBs
Position
4923259..4924128
Genome browser
AA seq
289 aa
AA seq
DB search
MHSYVSLVQCPEGTVVYTIKTGDTLNRIAQQYNTTVQAIISSNPGIDPYRLFIGQQICIP
QNLAVNCPAGSIPYVIKAGDTLGTIAQQYNTTVQAIININPQVDLNWIQVGQRICIPAVE
PPVHVRCPQDNYYVIMPGDTFYGIAQYFNVSISELQQLNPNINPNYIIVGQAICIPVAPS
PVRIEINKAAFTLTLYHNENVVKTYPVAIGKPSTPTPEGTFSTVNKQVNPGGPFGTRWIG
LSKPSYGIHGTSNPASIGTMASNGCIRLHNRDVNELFNFVPVGTTVRIF
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcatagttacgtttctcttgttcagtgccctgaggggacagtggtgtatacgattaaa
accggagatacactgaatagaattgcacagcaatataatacgacggtacaggcaataatc
agttcaaacccgggtatagatccctataggctttttatcgggcagcaaatttgcataccg
caaaatttagcggtgaattgtccggcaggctccataccttacgtaattaaagcaggagat
acactgggtacaattgcacaacaatataatacgacggtacaggcaattataaatatcaac
ccgcaagtagatcttaattggattcaagttggacagcggatctgtataccagcagtggaa
ccaccagtacatgtacgatgccctcaagataattattacgtaattatgcccggagatact
ttctatggtattgcacaatacttcaatgtatccatcagtgaacttcagcagttaaatccc
aatatcaatcccaattatatcatagtaggtcaggcaatctgcatacctgttgcaccgtca
ccggttcgtattgagattaataaggctgcctttacacttactttgtatcataacgaaaat
gtagtaaagacctatcctgttgcaatcggtaaacccagtacacctacccctgaggggaca
tttagcacagtaaataaacaggtaaatccaggtggacccttcggtacacggtggataggc
ttgtcaaaaccaagttatgggatccatggcaccagcaatccggcttccatcggcacgatg
gcatctaacggatgtattcggttgcataatagggatgtaaatgaactgtttaattttgtg
cctgttggaacaacggttagaatcttctaa
DBGET
integrated database retrieval system
