Geosporobacter ferrireducens: Gferi_26120
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Entry
Gferi_26120 CDS
T04493
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe03030
DNA replication
gfe03410
Base excision repair
gfe03420
Nucleotide excision repair
gfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gferi_26120
03410 Base excision repair
Gferi_26120
03420 Nucleotide excision repair
Gferi_26120
03440 Homologous recombination
Gferi_26120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfe03032
]
Gferi_26120
03400 DNA repair and recombination proteins [BR:
gfe03400
]
Gferi_26120
Enzymes [BR:
gfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gferi_26120
DNA replication proteins [BR:
gfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Gferi_26120
DNA repair and recombination proteins [BR:
gfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Gferi_26120
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gferi_26120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AOT73312
UniProt:
A0A1D8GQU4
LinkDB
All DBs
Position
5575277..5577943
Genome browser
AA seq
888 aa
AA seq
DB search
MQEKIIIIDGNSLINRAFYGLPPLTTKDGIYTNAVYGFVNMLYKIYEDYRPQYISVAFDR
KAPTFRHVEYEAYKAGRKRMPEELGQQLPILKELLDVMNIHRMEIDGFEADDLIGTLVRY
CEEKNLESLVVTGDRDALQLASDKTRILITKKGMTDLEIYTPDSIIERYEVTPSQFIDLK
GLMGDPSDNIPGVPGVGEKTAIKLLKQFGSIEKMIQNTKEIQNQKLREKIESNIEQAIFS
KRLATIKTDVPIELSLEALKRESPNQEKLMEVFRRLEFHSFIQKMKTNEETTELDTDMTK
IQTIENLEDVSDMAEAIERAAHCYIKIFGTGENVRNRKIVGISILIDDGHSYYLEFEKIG
QSLDVLKAIFENENILKSGHNIKNEILLLQKYGISLTGVDFDTSIAVYLLEPTRTSYEIH
EIYNTYLGKNMNSEETLIGKGKNRITFLDIDRDMLVKYGHQVCTAVKELKKILAVELENL
ELKKLFQEVEIPLIKVLADMEYEGFRVDHQMLSSLGKELNGKIEQLVSEIYDMAGEQFNI
NSTKQLGDILFEKLKLPAIKKTKTGYSTNIEVLEKLSKKHPIIAKIIEYRQYVKLKSTYI
DGLIDVINEKTKKIHSSFNQTVTATGRISSTEPNLQNIPIRLELGREIRKVFIPTDDNYL
LLDADYSQIELRVLAHISQDPGLMEAFEKEQDVHTMTASKVFDVPFDQVTSQQRSSAKAV
NFGIVYGISDFGLAENLGITKKEAQKYIDEYFDKYRGVKSYMNQAVEEGKKNGYVTTILN
RRRYIPELLSSNYNIRSFGERTAMNTPIQGSAADIIKVAMLRVYDELKRRNLRSKLILQV
HDELIVEIHQEEIEEVKQIVKKEMEEAIQLTVPLKVDIHLGKSWYDTK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagaaaataattataattgatggaaatagtttgatcaatagagctttttatggg
cttccgcctctaacaacaaaggacggtatctatacaaatgcagtttatggctttgtaaac
atgctgtataaaatatatgaagattatcgaccacagtacataagcgtggccttcgataga
aaagcccccacgtttagacatgtagaatatgaagcatataaagccggaagaaaaagaatg
cctgaagaattaggacaacagcttccaattttaaaagaacttttagacgtgatgaatatc
catcggatggaaattgatggttttgaagctgatgatctgattggaacgctggtaagatat
tgcgaagaaaaaaatctggagtcgctggtcgtgaccggggatcgggatgctttgcagctg
gcttcggataagacaagaatactcattacaaaaaagggaatgaccgaccttgagatatat
actcctgatagcattatagaaagatatgaggttacacctagtcaatttatagatctaaag
ggattaatgggtgatccatcagacaatattccaggcgtaccgggagttggagagaaaacg
gcaataaaactattaaagcagtttggaagcattgagaaaatgattcagaatacaaaagag
attcaaaatcaaaaattgagagaaaaaatagaatctaacatagaacaggcaatatttagt
aaacggctggctaccataaagacagatgttccaattgaactgtctctagaggctttgaaa
agagaatcgcctaatcaagaaaagttaatggaagtatttcgccgcctggagtttcacagt
tttattcaaaaaatgaaaacgaacgaagagacgacagaacttgatacagatatgacaaaa
attcaaacaattgaaaatttagaagatgtatcagatatggcagaagccatagagcgagcg
gctcactgttatattaagatatttggtacgggtgaaaacgtaagaaaccgtaaaattgtg
ggcattagtatcctaatagatgatggacatagttattatttggaatttgagaaaataggg
cagtcactagatgtgcttaaagctatctttgaaaacgagaatatactaaaatcaggtcat
aatattaaaaatgaaatcctattattacaaaaatacggtatatccttgactggtgtagac
tttgataccagcatagcagtatatttgctggagcctactcggacttcctatgaaatacat
gagatatataatacgtatctaggaaaaaatatgaatagtgaagaaacactaataggaaaa
ggaaagaatagaatcacttttctagacatagatcgagatatgcttgtaaaatatggtcat
caagtttgtactgcagtaaaagaattaaagaagattcttgcagttgagctggaaaattta
gaattaaaaaaacttttccaagaggtagaaataccgctgataaaggtccttgcagatatg
gaatatgaaggatttagggtagaccaccagatgttaagcagtctaggaaaagagttaaat
ggcaagatagaacaattagtatctgaaatctatgatatggcaggagaacagtttaatatc
aattcaacaaaacagcttggggatatattatttgagaaacttaagctgcctgcaataaag
aaaacaaagacgggttactctacgaatatagaagtactggaaaagcttagcaaaaaacat
ccaatcattgcaaaaattatagaatatagacaatatgttaagcttaagtccacctatatt
gatgggttgattgatgtaatcaacgaaaagacaaaaaagattcactccagttttaaccaa
acagttactgctactggtagaatcagtagtacggaaccaaaccttcaaaacattcctatt
cgattggagctggggagagaaataagaaaagtttttattccaactgatgacaattatctg
ctgttggatgcagattattcgcaaattgagctgagagtgcttgcacacatttctcaggat
ccaggcctgatggaagcttttgaaaaagagcaggatgtacatactatgacggcctcgaag
gtttttgatgttccatttgatcaggtaacttctcaacaacgcagcagtgcaaaagcagtt
aattttggaattgtctacggaattagcgattttggtttagcagaaaatttaggcattacc
aagaaagaagcacaaaaatatattgatgagtattttgataaatatagaggcgttaaatcc
tatatgaatcaggcggttgaggaaggtaagaaaaatggatatgtaacaacgatccttaat
cgaagaagatatataccagaattgctgtccagtaattataatatccgttcttttggagaa
agaacggcaatgaatacccccatacaaggaagtgcagcagatattataaaagtagctatg
ctccgtgtatatgatgagttgaaaagaagaaatctgagatcaaagctaattcttcaagtg
cacgacgaactgatcgttgaaatacatcaagaggagatcgaagaagtgaaacaaattgta
aaaaaagaaatggaagaggctattcagctgacagttccattaaaagtggatatccatttg
ggaaagagctggtatgatacaaaatag
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