Geosporobacter ferrireducens: Gferi_26720
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Entry
Gferi_26720 CDS
T04493
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe00260
Glycine, serine and threonine metabolism
gfe00460
Cyanoamino acid metabolism
gfe00630
Glyoxylate and dicarboxylate metabolism
gfe00670
One carbon pool by folate
gfe00680
Methane metabolism
gfe01100
Metabolic pathways
gfe01110
Biosynthesis of secondary metabolites
gfe01120
Microbial metabolism in diverse environments
gfe01200
Carbon metabolism
gfe01230
Biosynthesis of amino acids
gfe01240
Biosynthesis of cofactors
gfe04981
Folate transport and metabolism
Module
gfe_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Gferi_26720
09102 Energy metabolism
00680 Methane metabolism
Gferi_26720
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Gferi_26720
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Gferi_26720
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Gferi_26720
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Gferi_26720
Enzymes [BR:
gfe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Gferi_26720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AOT72835
UniProt:
A0A1D8GPK0
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All DBs
Position
5688795..5690027
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AA seq
410 aa
AA seq
DB search
MNFDNLMQVDIDVFNAIEKEIDRQQTKIELIASENFVSKAVMEAMGSHLTNKYAEGYPGK
RYYGGCEYVDIVEDLARERLKQLFNAEYVNVQPHSGANANLGVYFTILEPGDTVLGMNLS
HGGHLTHGSPVNISGKYYNFVEYGVSKEDEKIDYEEVRRIAKEVKPKLIVAGASAYSRII
DFKTFRTIADEVDAYLMVDMAHIAGLVAAGLHPNPCEHAHFVTTTTHKTLRGPRGGAILC
KEEFGKAIDKSIFPGIQGGPLMHVIAAKAVSFKEALSDEFKTYQKQVIKNAAKLAEELIK
RDFRIVSGGTDNHLLLVDLRNKNITGKDAELLLDEMGVTVNKNTIPYDPESPFVTSGIRI
GTPAVTTRGMKEEDMVTIAEIIKIVVENPTDHEDAKEMVEKLYRKYPLYE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgacaatctaatgcaggttgatatcgatgtattcaacgctattgaaaaagaa
atcgataggcagcagacaaaaattgaactgattgcatcagagaactttgtcagtaaagct
gttatggaagccatggggagtcacttgacaaacaagtatgcagagggttatccgggaaaa
cgttattatggcggctgcgaatatgttgatattgtggaagacttagcaagagagcgactt
aagcaattatttaacgccgagtatgtcaatgttcaaccacattccggggccaatgccaat
ctgggagtctattttaccattctagagcctggggacacggttttgggtatgaatctatcc
cacggaggacatttaactcatggaagtcccgtaaatatttccggtaaatattataatttt
gtagaatatggtgtatctaaagaagatgaaaaaatagattacgaagaagtacggcgtatc
gcaaaagaagtaaaacctaagcttattgtagcaggggctagtgcgtattccagaattata
gattttaaaacctttaggacaatagcagatgaagtagacgcttatctcatggtagatatg
gctcatatcgccggattggtagctgcagggcttcatccaaatccatgtgaacacgctcat
tttgtgaccacaacaacccacaaaaccttacgtggccccagaggtggtgccattttatgt
aaagaggaattcggtaaggccattgataaatccatttttccaggcattcaaggcggacct
ttgatgcatgttattgcagcaaaggctgtaagcttcaaagaggcgctgtcagatgagttt
aaaacatatcagaaacaagtcataaaaaatgctgcaaaattagctgaagagttaataaaa
agagatttccgcatcgtatccggcggaactgataatcacctattgctagttgatttgcgc
aataaaaatataacaggcaaagatgcagaactattgttggatgaaatgggtgtaaccgta
aataaaaatacaattccttatgatccagaaagcccatttgtaaccagtggtatacggatt
ggaactccagctgttacgaccaggggaatgaaagaagaagacatggttaccattgcagaa
attattaaaatcgttgttgaaaatccaacagatcatgaagatgcaaaagaaatggtagaa
aagctataccgcaaatatccattatacgaataa
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