Christiangramia flava: GRFL_0129
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Entry
GRFL_0129 CDS
T04640
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
gfl
Christiangramia flava
Pathway
gfl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GRFL_0129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfl03400
]
GRFL_0129
DNA repair and recombination proteins [BR:
gfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GRFL_0129
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GRFL_0129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_21
AAA_22
DnaJ_CXXCXGXG
nSTAND3
AAA_14
Viral_helicase1
cobW
NMDAR2_C
AAA_15
Motif
Other DBs
NCBI-ProteinID:
APU66853
UniProt:
A0A1L7I0Y2
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Position
159488..162319
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AA seq
943 aa
AA seq
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MAHNDEQIEVLGARVHNLKNIDVNIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGSLERPDVDKIDGLSPVIAIEQKTTSKNPRSTVGTITEIYDFLRLLFARGA
DAYSYKTGEKMVSYTDSQIKDLIIEKFKDRKVSILAPVIRSRKGHYRELFEQIAKQGFVK
VRTDEEVRDIEKGMKLDRYKTHDIEIVIDRLKIEDKTDSEKRLEESIKTAMYHGEDTLMI
LDQETGDIRYFSRNLMCPTTGISYPNPEPNSFSFNSPKGACPVCNGIGTLYQVNEHKIIP
DRSKSIKSGALAPHGPQKKNWVFSQLQLIADRFEFSLSDPIEKIPEEALQMILYGGKEKF
SKESKSLGITREYKIDFEGVAQFIETTYKNNDSTSLRRWAKEYMDKVDCPECEGSRLKKE
ALYFRVAEKNIAELSEMDISDLSDWFDGIEKNLSEKQLKIASEVIKEIRTRLQFLVDVGL
TYLNLNRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNEKLINSLESLR
DIGNSVIVVEHDKDMIERADYVIDIGPRAGKHGGEIISEGTPAELMQHETLTAQYLNGEK
EIAVPEERRKGNGKKIELKGATGNNLKNVDISIPLGKMIAVTGVSGSGKSTLINETLYPI
MNAHYFNGVKEPKPYKSIKGLEHIDKVIDINQSPIGRTPRSNPATYTGVFSEIRSLFAKT
PEALIRGYKPGRFSFNVKGGRCETCKGGGLRVIEMNFLPDVYVECETCQGKRFNRETLEI
RYKGKSIADVLEMTINEATDFFENIPKIYRKLKTIQDVGLGYISLGQQSTTLSGGEAQRI
KLATELSKRDTGNTFYILDEPTTGLHFEDIRVLMEVLNRLTNKGNTVLIIEHNLDVIKMA
DHIIDIGYEGGKGGGKIVATGTPEEIIKNKKSYTAQFLKKELK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaacgacgagcagattgaagttttaggagctagagtccataatctcaaaaat
atagacgttaacattccccgagaaaaactggtcgtaattaccggcctatcgggttccgga
aaatcatccctggcttttgacacgatttatgcggaaggccagcggcgatacatcgaaact
ttttcggcgtatgcccggcaattcctcggaagcctggagcgacctgatgttgataaaatt
gacggactctcaccggttattgcgatcgagcaaaagacgacgagtaaaaaccctcgaagt
acagtaggaacgattacggaaatatatgatttcctccgcctgctttttgcgagaggcgct
gatgcatacagctataagactggcgaaaagatggtgagctataccgatagccagatcaaa
gaccttataatagaaaagtttaaagatcgtaaggtgtctattctggcaccggtcatcaga
agtcgaaaagggcactaccgggaactttttgaacagatcgccaaacaggggtttgtaaag
gttcgtacagatgaggaggttcgcgatattgaaaaaggtatgaagctcgaccggtacaaa
acgcatgatattgagatcgttatagaccggctgaagattgaagacaaaaccgattctgaa
aaaaggctggaagaaagtatcaaaacggccatgtatcatggggaggacactttgatgatc
ctggaccaggaaacaggcgatatccggtattttagcaggaatttaatgtgtcccacaacg
ggaatcagttaccctaacccggagccgaacagcttttctttcaactctccaaaaggtgcc
tgcccggtttgcaacggtattggcacactttaccaggtaaacgagcataagatcattcca
gatcgctccaaatcgatcaaatctggtgctttggcacctcatggtccacaaaagaaaaac
tgggttttctcccagcttcagttgatcgccgatcgctttgagttcagcttgtcagaccct
attgaaaagattccagaagaggctctccaaatgatcctctacggcggaaaagagaaattt
tccaaagaatcaaaatcgctgggtattactcgggaatataagatcgattttgaaggtgtt
gcccaatttattgaaacaacctacaagaacaacgattctaccagcttgcgccgatgggcc
aaagaatatatggacaaggtggattgcccggaatgcgaaggcagtcgattgaaaaaagag
gcactttacttccgtgtggccgaaaagaatatcgcggaattgtctgaaatggacatcagc
gacctgagcgactggttcgatggtatcgaaaagaatctttcagaaaaacagctgaaaatt
gcttccgaagtgatcaaagaaatcaggacacggctacaattcctggtggacgtgggtctt
acctacctgaacctaaacaggagttctaaatctctttctggtggagaagcccagcgaatt
cggcttgccacccagattggttcacaactcgtgggcgtactatatattttggacgaaccc
agtattgggctgcaccaacgtgataatgaaaaactgatcaattccttagaaagtcttcgt
gatatcgggaactcggtaatcgttgtggagcatgacaaagacatgatcgaacgggcagat
tacgtcatcgacattggtccgcgtgctggaaaacacggcggcgagattattagtgaaggt
actccggcggaattaatgcagcacgaaaccctaacggcgcaatatcttaatggcgaaaaa
gagattgccgtgcccgaagaaaggcgtaaagggaatggcaaaaaaatagaactgaaagga
gccacgggaaacaacctgaagaatgtggatatttccattccattaggaaaaatgatcgcg
gtcaccggagtttcaggaagtggtaaatctacgctgatcaatgaaacgctctatccaatc
atgaacgcccattatttcaatggcgtgaaagagccaaaaccttataaatcgatcaaaggc
ctggaacatatcgataaggtgatcgatatcaaccaatcacctattggccgtacaccacgg
tctaacccggcaacgtataccggtgttttttctgaaattcgcagcttatttgccaaaact
ccggaagcactcatccgcgggtacaaaccggggcgtttcagttttaatgtaaaaggcgga
aggtgtgaaacctgtaaaggcggtggcctccgggtgatcgaaatgaattttctgccagat
gtttacgtggaatgcgaaacctgccagggaaaacgtttcaaccgtgaaacgctcgaaatt
cgatacaagggaaaatcgattgctgatgtgctggaaatgaccatcaatgaagcgactgat
ttcttcgaaaatattccgaagatctatcgaaaactgaagaccatccaggacgttggactg
ggttatatcagccttggccaacagtctacaacactttccggcggggaagcccagcgaatc
aaactggctaccgaactgtccaaaagagatacgggaaataccttttatatattagacgag
ccaaccacgggattacattttgaagacatccgggtgctcatggaagttctcaatagatta
accaataaaggaaacaccgtcctgatcattgaacacaacctcgacgtgatcaaaatggcc
gatcatattatcgatattggctacgaaggtggaaaaggcggcggaaagatcgtcgcaacc
ggaactccggaagaaattatcaaaaacaaaaaaagttataccgctcaattcctgaaaaag
gaactgaaatag
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