KEGG   Christiangramia flava: GRFL_0129
Entry
GRFL_0129         CDS       T04640                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
gfl  Christiangramia flava
Pathway
gfl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GRFL_0129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfl03400]
    GRFL_0129
DNA repair and recombination proteins [BR:gfl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GRFL_0129
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GRFL_0129
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 RsgA_GTPase AAA_21 AAA_22 DnaJ_CXXCXGXG nSTAND3 AAA_14 Viral_helicase1 cobW NMDAR2_C AAA_15
Other DBs
NCBI-ProteinID: APU66853
UniProt: A0A1L7I0Y2
LinkDB
Position
159488..162319
AA seq 943 aa
MAHNDEQIEVLGARVHNLKNIDVNIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGSLERPDVDKIDGLSPVIAIEQKTTSKNPRSTVGTITEIYDFLRLLFARGA
DAYSYKTGEKMVSYTDSQIKDLIIEKFKDRKVSILAPVIRSRKGHYRELFEQIAKQGFVK
VRTDEEVRDIEKGMKLDRYKTHDIEIVIDRLKIEDKTDSEKRLEESIKTAMYHGEDTLMI
LDQETGDIRYFSRNLMCPTTGISYPNPEPNSFSFNSPKGACPVCNGIGTLYQVNEHKIIP
DRSKSIKSGALAPHGPQKKNWVFSQLQLIADRFEFSLSDPIEKIPEEALQMILYGGKEKF
SKESKSLGITREYKIDFEGVAQFIETTYKNNDSTSLRRWAKEYMDKVDCPECEGSRLKKE
ALYFRVAEKNIAELSEMDISDLSDWFDGIEKNLSEKQLKIASEVIKEIRTRLQFLVDVGL
TYLNLNRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNEKLINSLESLR
DIGNSVIVVEHDKDMIERADYVIDIGPRAGKHGGEIISEGTPAELMQHETLTAQYLNGEK
EIAVPEERRKGNGKKIELKGATGNNLKNVDISIPLGKMIAVTGVSGSGKSTLINETLYPI
MNAHYFNGVKEPKPYKSIKGLEHIDKVIDINQSPIGRTPRSNPATYTGVFSEIRSLFAKT
PEALIRGYKPGRFSFNVKGGRCETCKGGGLRVIEMNFLPDVYVECETCQGKRFNRETLEI
RYKGKSIADVLEMTINEATDFFENIPKIYRKLKTIQDVGLGYISLGQQSTTLSGGEAQRI
KLATELSKRDTGNTFYILDEPTTGLHFEDIRVLMEVLNRLTNKGNTVLIIEHNLDVIKMA
DHIIDIGYEGGKGGGKIVATGTPEEIIKNKKSYTAQFLKKELK
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggcacacaacgacgagcagattgaagttttaggagctagagtccataatctcaaaaat
atagacgttaacattccccgagaaaaactggtcgtaattaccggcctatcgggttccgga
aaatcatccctggcttttgacacgatttatgcggaaggccagcggcgatacatcgaaact
ttttcggcgtatgcccggcaattcctcggaagcctggagcgacctgatgttgataaaatt
gacggactctcaccggttattgcgatcgagcaaaagacgacgagtaaaaaccctcgaagt
acagtaggaacgattacggaaatatatgatttcctccgcctgctttttgcgagaggcgct
gatgcatacagctataagactggcgaaaagatggtgagctataccgatagccagatcaaa
gaccttataatagaaaagtttaaagatcgtaaggtgtctattctggcaccggtcatcaga
agtcgaaaagggcactaccgggaactttttgaacagatcgccaaacaggggtttgtaaag
gttcgtacagatgaggaggttcgcgatattgaaaaaggtatgaagctcgaccggtacaaa
acgcatgatattgagatcgttatagaccggctgaagattgaagacaaaaccgattctgaa
aaaaggctggaagaaagtatcaaaacggccatgtatcatggggaggacactttgatgatc
ctggaccaggaaacaggcgatatccggtattttagcaggaatttaatgtgtcccacaacg
ggaatcagttaccctaacccggagccgaacagcttttctttcaactctccaaaaggtgcc
tgcccggtttgcaacggtattggcacactttaccaggtaaacgagcataagatcattcca
gatcgctccaaatcgatcaaatctggtgctttggcacctcatggtccacaaaagaaaaac
tgggttttctcccagcttcagttgatcgccgatcgctttgagttcagcttgtcagaccct
attgaaaagattccagaagaggctctccaaatgatcctctacggcggaaaagagaaattt
tccaaagaatcaaaatcgctgggtattactcgggaatataagatcgattttgaaggtgtt
gcccaatttattgaaacaacctacaagaacaacgattctaccagcttgcgccgatgggcc
aaagaatatatggacaaggtggattgcccggaatgcgaaggcagtcgattgaaaaaagag
gcactttacttccgtgtggccgaaaagaatatcgcggaattgtctgaaatggacatcagc
gacctgagcgactggttcgatggtatcgaaaagaatctttcagaaaaacagctgaaaatt
gcttccgaagtgatcaaagaaatcaggacacggctacaattcctggtggacgtgggtctt
acctacctgaacctaaacaggagttctaaatctctttctggtggagaagcccagcgaatt
cggcttgccacccagattggttcacaactcgtgggcgtactatatattttggacgaaccc
agtattgggctgcaccaacgtgataatgaaaaactgatcaattccttagaaagtcttcgt
gatatcgggaactcggtaatcgttgtggagcatgacaaagacatgatcgaacgggcagat
tacgtcatcgacattggtccgcgtgctggaaaacacggcggcgagattattagtgaaggt
actccggcggaattaatgcagcacgaaaccctaacggcgcaatatcttaatggcgaaaaa
gagattgccgtgcccgaagaaaggcgtaaagggaatggcaaaaaaatagaactgaaagga
gccacgggaaacaacctgaagaatgtggatatttccattccattaggaaaaatgatcgcg
gtcaccggagtttcaggaagtggtaaatctacgctgatcaatgaaacgctctatccaatc
atgaacgcccattatttcaatggcgtgaaagagccaaaaccttataaatcgatcaaaggc
ctggaacatatcgataaggtgatcgatatcaaccaatcacctattggccgtacaccacgg
tctaacccggcaacgtataccggtgttttttctgaaattcgcagcttatttgccaaaact
ccggaagcactcatccgcgggtacaaaccggggcgtttcagttttaatgtaaaaggcgga
aggtgtgaaacctgtaaaggcggtggcctccgggtgatcgaaatgaattttctgccagat
gtttacgtggaatgcgaaacctgccagggaaaacgtttcaaccgtgaaacgctcgaaatt
cgatacaagggaaaatcgattgctgatgtgctggaaatgaccatcaatgaagcgactgat
ttcttcgaaaatattccgaagatctatcgaaaactgaagaccatccaggacgttggactg
ggttatatcagccttggccaacagtctacaacactttccggcggggaagcccagcgaatc
aaactggctaccgaactgtccaaaagagatacgggaaataccttttatatattagacgag
ccaaccacgggattacattttgaagacatccgggtgctcatggaagttctcaatagatta
accaataaaggaaacaccgtcctgatcattgaacacaacctcgacgtgatcaaaatggcc
gatcatattatcgatattggctacgaaggtggaaaaggcggcggaaagatcgtcgcaacc
ggaactccggaagaaattatcaaaaacaaaaaaagttataccgctcaattcctgaaaaag
gaactgaaatag

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