Christiangramia flava: GRFL_0409
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Entry
GRFL_0409 CDS
T04640
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gfl
Christiangramia flava
Pathway
gfl03030
DNA replication
gfl03430
Mismatch repair
gfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GRFL_0409
03430 Mismatch repair
GRFL_0409
03440 Homologous recombination
GRFL_0409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfl03032
]
GRFL_0409
03400 DNA repair and recombination proteins [BR:
gfl03400
]
GRFL_0409
Enzymes [BR:
gfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GRFL_0409
DNA replication proteins [BR:
gfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GRFL_0409
DNA repair and recombination proteins [BR:
gfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GRFL_0409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DEDDh_C
RNase_H_2
DUF7508
Rv2179c-like
DNA_pol_A_exo1
T5orf172
Motif
Other DBs
NCBI-ProteinID:
APU67133
UniProt:
A0A1L7I1S4
LinkDB
All DBs
Position
518734..520107
Genome browser
AA seq
457 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYKFDGEKVVDQFISLVNPEQPIQPFVVNLTGINNEM
LRNAPKFYEVAKRIVEITTDCVLVAHNAKFDYRILRTEFRRLGYEFERESLCTVELSKKL
IPGLQSYSLGKLVRALGIPLSDRHRAAGDAQATVKLFKMLLNKDVEKNILKTHIRKEPKR
SLDTKLVHILEELPSSTGVYYFHDENGEIIYVGKAKNIRKRINQHFTNENAKSREMQKKV
ASVSFENTGNELLALLKENQEIKELKPKYNRALKRDIFSHALYHFKDDNGYINLKIGKAS
RTKKSITTFSTLRSAKNSLQAWIEEYELCSRLGGVHNGSGNCFNYTIKSCHGACIEEEPA
EAYNERVEKLITRYSYENQNMILIGRGRDIDEKCAILIEDGEFKGSGYFNLNYQINNLDI
IKSIITPMRNNRDAQHIIQSYLRKKHHFKIVQLSVHE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatattagacatagaaactaccggcggaaagtataatgaagaggggatcacc
gagatcgccatctataagtttgacggggaaaaggttgttgaccagttcatcagcctggtg
aatcccgaacagcccattcagccgttcgtggtgaatcttaccggcatcaataatgagatg
ctccgcaatgctcccaaattttatgaggtggcaaaaaggatcgtagagatcaccacagac
tgtgtcctggtggctcataatgccaaatttgattaccgaattttgcgcacagaatttaga
cgactcggttatgaattcgagcgtgaaagcctgtgtaccgtagaactttctaaaaaactg
attcccggtttacaatcttacagccttggaaaactggttcgcgcgctgggaatcccgctg
agcgaccggcatcgtgctgcaggtgatgcacaggcaaccgtgaagttgttcaaaatgctg
ctgaataaggatgtggaaaagaacattcttaaaacccatattcggaaagaaccgaagcgc
agcctggataccaagctggtgcacatcctggaggaactgcccagttctaccggcgtttac
tatttccacgacgaaaatggtgagatcatatatgtgggtaaggccaaaaacatcaggaag
cgcattaatcagcattttactaacgagaacgccaagtcccgtgaaatgcagaaaaaagtg
gcttcagtttcttttgaaaacacgggtaacgagctgcttgcccttctgaaagaaaaccag
gaaatcaaggagctcaaaccaaaatataaccgtgcgctaaaaagggatattttcagccat
gcgctgtatcatttcaaggatgataacgggtatatcaacctgaagatcgggaaggccagc
aggaccaagaaaagcatcacgacctttagcacccttcgttctgccaagaattcattgcaa
gcctggatcgaggagtacgaactctgctcccgccttggcggcgttcataatggcagcggc
aattgcttcaattacactattaaaagctgtcatggcgcctgtatcgaagaggaaccggca
gaggcttataacgaacgcgtagaaaagcttattacccgttattcctatgaaaatcagaat
atgatcctcatcgggcgagggcgcgatattgatgaaaaatgtgcgatcctcattgaagac
ggagagtttaaaggcagcggttatttcaacctgaattaccagatcaacaatctggatatc
attaaatctatcatcactcccatgcgcaacaatcgcgatgcgcagcatatcatccagagc
tacctccggaaaaagcaccattttaaaatcgttcaattatcagttcatgaataa
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