Christiangramia flava: GRFL_0880
Help
Entry
GRFL_0880 CDS
T04640
Name
(GenBank) HYR domain protein
Organism
gfl
Christiangramia flava
Pathway
gfl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GRFL_0880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HYR
HYR_4C
Bact_surface_Ig-like
CHU_C
E1_DerP2_DerF2
Big_13
Big_9
DUF11
NPCBM_assoc
PEGA
Integrin_A_Ig_3
CSD
Motif
Other DBs
NCBI-ProteinID:
APU67604
UniProt:
A0A1L7I314
LinkDB
All DBs
Position
1029222..1037636
Genome browser
AA seq
2804 aa
AA seq
DB search
MNPRDITVFDGYAYVEGNVVAEYNLPISGFHTSQEGPVNMKLGMVASEGDVGISGDYFKI
KKHSSNQYLTLQHSKNSSNNFFNSSIVNDDPRNPNLKNNTGIDISILNVPNENNSVVTNN
QTSTTFKYGSTQDTYVIYSLAMSVDAYQPEIEGISSISSINGQNYTSGTTVQPGQEVTYK
IELRNKGTEALENVSLNIPIPYNATYVLESAYTNIYYAPNPTPNSIDYNPNQGSNGVLTW
EIGDLPVVENNNTLLAELYITVKATENCTLLKYIECQGNSGINFVGALNGKGKITGVGFQ
NTELIQGYQTNGTCIGEPIRNPLFIPIDSTQFIQDNCSNENDLTFQFCDGGSSISFSSIA
DEFPVNTRFYDSFPLTQSSTEYTFENPFPNSTKSYFAVLPGVNDCYIPFTLQIEELKIEF
SAFSKSCDNSYGSISVDNYDPAIQYILLDNNNAPTEISISDSGIFLELEPGQYRIKATSE
RCEIISAIITVLDEQEIPELPSNITVDPATCGLNNGSISFDVNSNYEYVLRDANEIIVTG
EGTFPSLASGNYSLTVYNKNCQNSTIIELTETLDNVKPVITACAADITNQPADEGSCSAT
NVNLGTITATDNCDTNLTITNDAPNVFPAGSTTVTWTVTDDAGNFTTCTQVVTVVDNQDP
KIISCAADKTVNADAGLCTASGVDLGSVEATDNCDTDLSITNNAPAIFPAGKTTVIWTIT
DDAGNSVTCEQEITVIDNQDPVITACAADISDLPADNGSCSATNVNLGSVTATDNCDADL
SITNNAPSEFPLGETVVTWTVTDDAGNSVTCEQTITVVDTQKPVITSCASDITNQPADEG
SCSATNVNLGNITATDNCDTDLTITNDAPTVFQAGTTIVTWTVKDKAGNIATCTQSVTVV
DTEDPVITSCATDKTVNADNGFCYATGVDLGSITATDNCDTNLEITNNAPAQFPVGTTTV
TWTVKDDADNTAICTQKITVVDNQDPTTEQPDNITVNADPTICGATVNFNKVGAEDNCGL
ESVEITEGLSSGEVFPVGTTTVTWTVTDIHGNTTTVSFDVTVVDNTKPIISCPGDMVVPT
AEGEDSVIVNFNDATATDNCDVTVEQTAGPTSGSDLAIGTYTVEYTATDASGNTATCSFK
IEVVDDEDPTISCPGDISDINDEGVCGAVVTFATPDASDNSGSVAVEQVAGPASGSVFPV
GTTTVTFRATDDDDNFVECSFDVTITDNEAPEITCPADIEITTEDGLCGVSLANLDLGMA
TAADNCEGEITITNNAPTTFPLGTTEVTWTATDANGNSATCVQKVTVSDDEAPVVTQIEN
YTDIDTDPETCGAVINYGTIQATDNCEIESIEMTEGIASGQVFPVGITTVTYVVTDASGN
QSTMTFTVTVVDNEDPMITCPGNIEVSTAEGENFAVVTFEDATATDNCEVTVTQTGGQAS
GSEFGPGVHTIEYTATDASGNTAVCSFTITVEDDEDPTITCPENIVQPNDPGLCGAAVEF
AMPEFADNSGQVTIEQLTGPASGEFFEVGTTTVTFRATDAAGNTAECSFDVTVNDTEAPT
TETMENITVNAEQEFCGAVVDFGMIGADDNCGLESVEITEGLASGEVFPVGTTTVTWTVT
DIHGNTTTVSFDVTVVDNTNPIISCPGDMTVTTATGQNYAIVEFADATATDNCDVTVEQT
AGPLSGSQFPIGDTTVTFTATDNSGNTAECSFTVTVEDGEDPSISCPENIVTPNDPGICG
AAVEFDMPEFADNSGEVSIEQIAGPASGEVFPVGTTTVTFRATDDDDNFVECSFDVTITD
NEAPEITCPADIEITTEDGLCGVSLANLDLGMATAADNCEGEITITNNAPTIFPLGTTEV
TWTATDANGNSATCVQKVTVSDDEAPVVTQIENYTDIDTDPETCGAVINYGTIQATDNCE
IESIEMTEGIPSGQVFPVGTTTVTYVVTDASGNQSTMTFTVTVVDNEDPMITCPGNIEVS
TAEGENFAVVTFEDATATDNCEVTVTQTGGQASGSEFGPGVHTIEYTATDASGNTAVCSF
TITVEDDEDPTITCPENIVQPNDPGLCGAAVEFAMPEFADNSGQVTIEQLTGPASGEFFE
VGTTTVTFRATDASGNTAECSFDVTVNDTEAPTTETMENITVNAEQEFCGAVVDFGMIGA
DDNCGLESVEITEGLASGEVFPVGTTTVTWTVTDIHGNTTTVSFDVTVVDNTNPIISCPG
DMTVTTTTGQNYAIVEFADATATDNCDVTVEQTAGPLSGSHFPIGDTTVTFTATDNSGNT
AECSFTVTVEDGEDPSISCPENIVTPNDPGICGATVEFDMPEFADNSGEVSIEQIAGPAS
GEVFPVGTTTVTFRATDAAGNTAECSFDVTVNDDEGPSIEQLSNIEVSNDPGTCGAVVDF
LIPEATDNCGIESVELTEGAAPGSEFPIGTTTITYTATDTNGNTATSTFTITVTDDEAPV
IECPESINIQVEIGTSSVIVNYTMVSYTDNCEGTTVEMTEGIASGEEFPVGETTVTYTVT
DAAGNTASCSFTVTVEEEPLPEPPGAPGTTVTQATCAEPTGTIVVTAVEGVTYSIDGENY
QESNTFSEVAPGTYQVTVKDEFGQVSEATTVTVNEAVAAEIETTDATLCIDDSTLDLFDL
FLSEYDENGTWIDNDNSGALTDSFLDPSQADLGTYTFDYVIEGNCPSVTTVTVTINDDCV
PLACTVQDVRDNISKVVTPNGDGRNDYFEIGQGTECDFTYDVKIFNRWGAEIFTATSYQN
NWDGFSEKSFTSSNQLPSGTYYYVIEVRNTDFEPITGYIYLGTK
NT seq
8415 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagagacattactgtttttgatggttatgcttacgttgaaggtaatgttgtc
gccgaatacaatcttccaatttcgggatttcacacttctcaggaaggtcctgtaaatatg
aagcttggcatggttgctagtgaaggagatgttggtatttcaggagattattttaaaata
aaaaagcattcttcaaatcaatatttaaccttacaacattctaaaaactcttccaataac
ttttttaattcctccatagttaatgatgatccgcggaatcctaatttaaaaaacaataca
ggaattgatattagtattcttaatgtacctaatgaaaataattcggttgtaaccaataat
caaacctctacaacttttaaatacggatctactcaagacacctatgtcatatattcatta
gcgatgtcggtagatgcttaccagccagaaatagaaggaataagctccatcagttccatc
aacggacagaattacacctcgggcactactgttcagcccggtcaggaagtgacttataaa
atagaattacgaaacaaaggtaccgaagcgctggaaaatgttagtttaaatattcctata
ccttataatgccacatatgttttagaatccgcatatacgaatatttactacgctccgaat
cctactccaaattccattgattataatcctaatcaaggtagcaatggagtgcttacatgg
gaaatcggagatcttcccgtggtagaaaacaacaacactttattagcagagctgtatatc
accgtcaaggctacagaaaactgtaccttattaaaatatatagaatgtcaaggtaattcg
ggaattaattttgttggcgctctcaatggtaaaggtaaaatcaccggggttggttttcag
aatactgaattaattcagggctatcaaacgaatgggacttgtattggagaaccaattcgt
aatcctttatttattcctattgattccacacagtttattcaggataattgcagcaatgaa
aatgatttaacattccaattttgcgatggcggatcttctatcagtttttcttccattgca
gatgaatttccagtcaatacaaggttctatgattcatttcctttaacccaatcttctact
gaatatacttttgaaaatccttttcctaattccacaaaatcatatttcgctgtactccct
ggagtaaatgattgctacataccttttactcttcaaattgaggaattgaaaatagaattc
tcagctttttcaaaatcctgtgacaatagctacggtagtatttctgtggataattatgat
cccgcaattcaatatattttattagacaataacaatgcgccaacagaaatttcgatttct
gattctggaattttcttagaacttgaacctggccaataccggattaaagcaactagcgaa
agatgtgaaataatttctgctattattactgttcttgatgagcaggaaataccggaattg
ccatcaaacataacggtagatcctgcaacctgcggtttaaataacggaagtatttctttt
gacgttaatagtaactacgaatatgtactacgcgatgcaaacgaaataatagtaacaggt
gaagggacttttcccagtcttgctagtggaaattattctttaacggtctataataagaat
tgtcaaaattccactatcatcgaacttactgaaactctggataatgtgaaaccagtgatc
acagcatgtgctgctgatattaccaaccagccggctgatgagggaagctgttctgccacg
aacgtgaaccttggaactatcaccgctactgacaattgtgacactaacctaaccatcacc
aatgatgcgcctaacgtattccctgctggatcaactaccgttacctggaccgtcaccgat
gacgcgggtaatttcacaacctgcacccaggtagttacggtcgtagacaatcaggaccca
aaaatcatcagttgtgcggctgataaaaccgtaaatgccgatgctggtctttgtactgct
tcaggagtagatcttggatcggtggaagctactgataattgtgacacagaccttagcatt
accaataatgctccggcaatttttccagcgggaaaaacaactgtaatctggactattact
gatgacgctggaaattctgttacttgcgaacaggaaattactgtaatcgataatcaggat
ccggttattactgcatgtgctgctgatataagtgatctgccagcagataacggaagctgt
tctgctactaacgtaaaccttggaagcgtaactgcaactgataattgcgatgctgacctt
agcattaccaataatgctccttctgaatttcctttaggtgaaacagtagttacctggaca
gttactgatgatgccggaaattctgtaacctgtgaacaaacaatcactgttgtagacact
caaaagcctgtcatcacttcctgtgccagtgatattactaatcagcctgccgacgaagga
agctgttctgcaacaaatgtgaatctgggaaatattacggctactgacaattgtgatact
gaccttaccattacaaatgacgctccaactgttttccaggctggtactaccattgtaacc
tggactgtaaaagataaagcaggaaacatagccacctgtacacaatctgttaccgtggtt
gatacggaagatccagtgatcacttcttgtgcgacagacaagacagttaatgctgataat
ggtttctgctatgcgaccggtgtagatttaggaagcattaccgctactgataattgcgat
acgaatttggagatcaccaataatgcgcctgctcaattcccagtaggaactactacagta
acctggacagtaaaagatgatgcggacaataccgccatttgtacccagaaaataacagtc
gttgacaatcaggatccaaccaccgagcaaccagataacattactgtaaatgcagatcca
actatatgcggggctacagtgaacttcaataaagttggtgccgaggataactgcggactg
gaatctgtagaaattactgaaggattgtcctctggtgaagtattccctgtaggaactact
acagtaacctggaccgtgaccgatattcatggaaataccactactgtttctttcgatgtg
actgtggttgacaatactaaaccgatcatcagctgtcctggtgatatggttgttccaaca
gccgaaggtgaggattctgtaattgtgaactttaacgatgctacagctactgataattgt
gatgtgactgttgaacaaactgcgggtccaacttctggttcagatctggcaatcgggact
tacactgtagaatatactgcaaccgatgcttctggaaataccgctacctgctcttttaag
attgaagttgttgatgatgaagatccaacaattagttgccctggcgacatctctgatatt
aatgacgaaggcgtttgtggtgctgtggtaactttcgcaacaccagatgcttctgataat
tctggaagtgttgcggtagagcaagttgctggtcctgcttctggatctgtattcccggtt
ggaactacaactgtaactttcagagcgactgatgatgatgacaattttgtagagtgttct
tttgatgtaaccattactgataatgaagctcctgaaattacttgtccggctgatattgaa
attactactgaagatggcctttgtggagtgtctttagcgaaccttgatctgggaatggct
actgctgctgataattgtgaaggtgagatcaccattacaaacaatgcaccaaccaccttc
cctcttggaactactgaggtaacctggactgcgactgatgctaacggaaactctgctacc
tgtgtacagaaagtaactgttagcgatgatgaagctccagttgtgactcaaatagaaaac
tatactgatatcgataccgatccggaaacctgtggtgctgtgatcaactacggtactatt
caggctactgataactgtgagatcgagtcgatcgaaatgaccgaaggtatcgcttctggt
caggtattcccagtgggaattactacagtaacttatgtggtaactgatgcttctggcaac
cagtctacaatgactttcacagtaaccgtggtagataacgaagatcctatgatcacctgt
cctggtaatatcgaagtatcaactgctgaaggtgaaaacttcgcggtagttaccttcgaa
gatgctacggcaactgacaactgtgaggttactgttacccaaactggcggacaggcttct
ggttctgagttcggtcctggtgttcatactattgaatacactgcaactgatgcgtctgga
aatactgcggtatgttctttcacgatcactgtagaagatgatgaggatccaacgatcacc
tgtcctgaaaatattgttcagccaaatgatcctggattatgtggcgctgctgtagaattc
gctatgcctgagtttgcagataattctggccaggtaaccatcgaacaactaaccggtcct
gcttcaggtgaattcttcgaagttggaactacaaccgtgactttcagagcaactgatgct
gccggaaacactgctgaatgttctttcgatgtaacggtaaatgataccgaagcaccaact
actgaaacgatggaaaacatcactgtgaacgcagaacaggaattctgtggtgctgtggta
gatttcggaatgatcggtgctgatgacaactgcggactggaatctgtagaaattactgag
ggactggcttctggtgaagttttccctgtaggaactactacagtaacgtggaccgtgacc
gatattcatggaaacaccactacggtctctttcgatgtgactgtggttgacaataccaac
ccgatcatcagctgtcctggtgatatgactgtgacaaccgctactggtcaaaactacgca
atcgttgagtttgcagacgcaactgcaactgacaattgtgatgtgactgtagaacaaact
gctggtccattatcaggatctcagttccctatcggtgatactactgtaacatttactgct
acagataattctggaaatacggcagaatgtagcttcactgttactgttgaagatggcgaa
gatccttcgatctcgtgccctgaaaatattgtaactccaaatgatcctggaatctgtgga
gctgcagtggaatttgacatgcctgaatttgcagacaattctggagaagtaagtatcgag
caaattgctggtccagcttctggagaggtgttccctgtgggaactacaactgtaactttc
agagcaactgatgatgatgacaattttgtagagtgttcattcgatgtaaccattactgat
aatgaagcacctgaaattacctgtcctgcagatattgaaattactactgaagatggcctt
tgtggagtgtctttagcgaaccttgatctgggaatggctactgctgctgataattgtgaa
ggtgagatcaccattacaaacaatgcaccaaccatcttccctcttggaactactgaggta
acctggactgcgactgatgctaacggaaattctgctacctgtgtacagaaagtaactgtt
agcgatgatgaagctccggttgtgactcaaatagaaaattatactgatatcgataccgat
ccggaaacctgtggtgctgtgatcaactacggtactattcaggctactgataactgtgag
atcgagtcgatcgaaatgaccgaaggtatcccttctggtcaggtattcccagtgggaact
actactgtgacttatgtggtaactgatgcttctggcaaccagtctacaatgactttcaca
gtaactgtagtagataacgaagatcctatgatcacctgtcctggaaatatcgaggtttca
actgctgaaggtgaaaacttcgcggtagttaccttcgaagatgctacggcaactgataac
tgtgaggtaactgttacccaaactggcggacaggcttctggttctgagttcggtcctggt
gttcatactattgaatacactgcaactgatgcctctggaaatactgcggtatgctctttc
acgatcactgtagaagacgatgaagacccaacgatcacctgtcctgaaaatattgttcag
ccaaatgatcctggattatgtggcgctgctgtggaattcgctatgcctgagtttgcagat
aattctggccaggtaactatcgaacaactaaccggtcctgcttcaggtgaattcttcgaa
gttggtactacaaccgtgactttcagagcaactgatgcttccggaaacactgctgaatgt
tctttcgatgtaacggtaaatgataccgaagcaccaactactgaaacgatggaaaacatc
accgtgaacgccgaacaggaattctgtggtgctgtggtagatttcggaatgatcggtgct
gatgacaactgcggactggaatctgtagaaattactgaaggactggcttctggtgaagta
ttccctgtaggaactactacagtaacctggaccgtgaccgatattcatggaaacaccact
acagtttctttcgatgtgactgtggttgacaataccaacccgatcattagctgtcctggt
gacatgactgtgacaactactactggtcagaactacgcaatcgttgagtttgcagacgca
actgcaactgacaattgtgatgtgactgtagaacaaactgctggcccattatcaggatct
catttccctatcggtgatactactgtaacgtttactgctacagataattctggaaatacg
gcagaatgtagcttcactgttactgttgaagatggcgaagatccttcgatttcgtgccct
gaaaatattgtaactccaaatgatcctggaatctgtggagctacagtggaatttgacatg
cctgaatttgcagacaattctggagaagtaagtatcgagcaaattgctggtccagcttct
ggagaggtgttccctgtgggaactacaactgtaactttcagagcaactgatgctgccgga
aacactgctgaatgttctttcgatgtaactgttaacgatgatgaaggtccttcgattgaa
caactttcaaatattgaagtaagcaacgatcctggaacatgtggtgctgtggtagatttc
ctaattcctgaagcgactgataattgcggaattgaaagtgtagaacttactgaaggtgct
gctcctggaagtgaattcccaattggaaccacaacaatcacttacaccgctactgatact
aatggtaatacagcgacttcaactttcactataacagtgactgatgatgaagctccggtg
atcgagtgtccagaaagtataaatattcaggtggaaattggaacttccagcgtcatagtg
aactataccatggtaagttatactgataactgcgaaggaaccactgtggagatgacagaa
ggaattgcctctggtgaggaattcccagtgggcgaaaccactgttacctacactgttact
gatgccgccggaaacacagccagctgtagctttaccgtaacggtagaagaagaaccgcta
ccggaaccaccaggagctcctggaacaaccgtaacgcaggccacctgtgccgagccaacc
ggaactattgttgtgaccgctgtggaaggtgttacttacagcatcgacggtgaaaactac
caggaaagcaacaccttctctgaagttgctcctggaacatatcaggtaacagtaaaagat
gaattcgggcaggtttccgaagcaacaacagtaactgttaatgaagctgtagctgcggaa
attgaaacaactgatgcaacgctgtgtattgatgattccacgctggacctattcgatctt
ttcctaagcgaatatgacgaaaacggaacctggatagataatgacaattctggagcgttg
accgattcattcctggatccttcacaggcagatttaggcacctatacttttgattacgtg
atcgaaggcaactgtccttcagtaacaacagtaacggtaactataaatgatgattgtgta
ccattggcctgtacggttcaggatgtacgcgacaacatctctaaagtggtaactccaaat
ggagacggacgaaatgattatttcgaaattggccagggaaccgagtgtgactttacgtat
gatgtgaaaatattcaaccgttggggtgcagagattttcactgccaccagctatcagaat
aactgggatggtttctctgagaaatcgttcacaagttcgaaccagttaccgtcaggtacc
tactactacgtgatcgaggtaagaaatacagatttcgagccaataactggatacatctat
ttaggaacaaaataa
DBGET
integrated database retrieval system