Christiangramia flava: GRFL_1812
Help
Entry
GRFL_1812 CDS
T04640
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gfl
Christiangramia flava
Pathway
gfl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GRFL_1812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfl03400
]
GRFL_1812
Enzymes [BR:
gfl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GRFL_1812
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GRFL_1812
DNA repair and recombination proteins [BR:
gfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GRFL_1812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Zn_ribbon_6
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
APU68536
UniProt:
A0A1L7I4L7
LinkDB
All DBs
Position
2052024..2052803
Genome browser
AA seq
259 aa
AA seq
DB search
MPELPEVSYFKKYLDATALHQKIRKVSAPEELILGTKEVAFQQLQGDQLKESRRLGKYLF
VATENRNTLIFHFGMTGNFEYRQGEEPPKYTYFTLHFENDFQLFFTCPRKLARVYLVEDA
EVFRKEHELGQDALEASEEEFLELADGRRGSMKGFLMNQKIISGIGNLYSDEILFQSRIH
PATAVNDLNQKELKAIFRNIEKVLLRVTKSKMDSSSLPQSYITPYRKAGAACPRGNGKIE
KAKIAGRTSYFCVNCQPAK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtttcctattttaaaaaatacctcgacgccaccgctcttcat
cagaaaatcaggaaagtttccgcgcctgaggagctaatccttggaactaaggaagtcgct
tttcagcaattgcagggagaccagctgaaggaaagcaggcgcttgggaaaataccttttc
gtagctactgaaaatagaaataccttgatctttcactttgggatgaccgggaattttgaa
taccggcagggagaggaaccaccaaaatatacctatttcacgctgcattttgagaatgat
tttcagttgttctttacctgtccaagaaaactcgccagggtgtatttagtggaagatgcg
gaagttttccggaaagaacatgaattgggacaggatgctttggaggcttcagaagaagaa
tttctggaactggccgatggtcgcagaggcagtatgaaaggttttttgatgaatcagaag
atcatttccgggattggcaatttatattctgacgaaatactgtttcagagccgtatccat
ccagctactgccgtaaacgacctgaatcaaaaagaactgaaggcaattttccgaaatatt
gaaaaagtattgctgcgagtaacgaaaagtaaaatggacagttcgagtttaccgcaaagc
tatatcacgccatatcgaaaagcgggagccgcttgtccgcgtggtaatggaaagattgaa
aaagctaaaattgccggaagaaccagctatttttgtgtaaactgtcagccagcaaaatga
DBGET
integrated database retrieval system
