Christiangramia flava: GRFL_2193
Help
Entry
GRFL_2193 CDS
T04640
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
gfl
Christiangramia flava
Pathway
gfl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gfl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GRFL_2193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfl03021
]
GRFL_2193
Transcription machinery [BR:
gfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GRFL_2193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
DUF6285
PgaD
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
APU68917
UniProt:
A0A1L7I5N2
LinkDB
All DBs
Position
complement(2475052..2475915)
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDNRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKTFAFLEQSHERPPSAEEIAKELDMTINDVKESMKNSGRHV
SMDAPLVEGEDSNLYDVLRSGESPNPDKELLHESLRTEIERALETLTPREADVIRLYFGL
GDQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactgaaaattacgaagcaggtaactaatcgtgaaactgcttcgctggacaag
tatttgcaagaaattggaaaagtagatttaattactgctgatgaggaagtagaattagca
caaagaattaaagccggtgataaccgcgctttggaaaagcttacaaaagcaaaccttcgt
ttcgtggtatctgtagcgaaacaatatcaaaatcaagggcttacccttcccgatcttatt
aacgagggtaacttaggacttattaaggctgccaaacgtttcgatgaaactcgtggtttc
aaattcatttcatacgctgtttggtggatccgtcagtcaatccttcaggcgcttgccgaa
cagtcgcgtatcgttcgtctaccgctgaacaagattggttcgatcaacaaaatcaacaaa
acatttgcatttttagagcaatctcacgagcgcccaccaagtgcggaagagatcgcaaaa
gagttagatatgaccatcaatgacgtgaaggaatctatgaagaactccggccgtcacgta
tcgatggatgctcctttagtggaaggtgaggattctaacctttatgacgtattgcgttct
ggtgaatctccgaaccctgataaagagttactacacgaatcattgagaacagagatcgag
agagctttagaaactttaacacctcgtgaagcagacgttattcgcctgtatttcggtctt
ggagatcaacacccaatgactttagaagaaattggcgagacttttgatctaacaagggaa
agagttagacaaattaaagaaaaagccattagaagattaaaacatacttcccgaagtaaa
attttaaaaacgtatcttggctaa
DBGET
integrated database retrieval system
