Christiangramia flava: GRFL_2446
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Entry
GRFL_2446 CDS
T04640
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gfl
Christiangramia flava
Pathway
gfl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gfl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GRFL_2446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfl03021
]
GRFL_2446
03400 DNA repair and recombination proteins [BR:
gfl03400
]
GRFL_2446
Enzymes [BR:
gfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GRFL_2446
Transcription machinery [BR:
gfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GRFL_2446
DNA repair and recombination proteins [BR:
gfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GRFL_2446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
APU69170
UniProt:
A0A1L7I6E7
LinkDB
All DBs
Position
2763818..2768119
Genome browser
AA seq
1433 aa
AA seq
DB search
MARNNDKNTVQRFNQISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQPGNAKDEEGKPLKKMDFLTEEEYLNILDELPQENQY
LEDSDPNKFIAKMGAECLIEILKRIDLDELSYELRHKANNETSKQRKTEALKRLQVVEAF
RDANENRENLPEWMIMKVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLM
EIKAPEVILRNEKRMLQESVDSLFDNTRKSSAVKTDSNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPELKMYECGLPKNMAAELYKPFIIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLACTAFNADFDG
DQMAVHLPLGPEAILEAQLLMLASHNILNPANGSPITVPSQDMVLGLYYMTKHKKSTDEE
PVKGEGLTFYSAEELVIAYNQKKVDLNAGIKIRTKDYNDKGELVYQIIDTTVGRVLFNET
VPEIAGFINEVLTKKSLREIIGKILRNTSVPETADFLDKIKGLGYGFAFRGGLSFSLGDI
IIPAEKQSMIDEANEQVEAIIGNYNMGLITNNERYNQVIDIWTSTNAGLTELAMKRIRED
KQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSNSGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNEDDCGTLRGVEVRPLKKNE
EIVESLGERILGRISLNDVYDPSTEELLVAANEEITEEIVKKIDAAPIESVEVRSPLTCE
AKKGICIKCYGRNLATNKMVQTGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEENR
LEAKFNGIAEIEDLKVVQGEAPDGGTSEIVISRTAEVKIKDKKTGVVLSNNNIPYGASIN
IEDGAEVKKGDVICTWDPYNGVIISEFAGKIKYENVEQGITYQVEIDEQTGFQEKVISES
RNKKLIPTLHILGKKDEVIRSYNLPVGAHLMVDNGEKIGVGKILVKIPRKSSKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIVESKLGEIKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPEDILNIKGPNAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVQIVDPGDTIFLENQLVHKDDFIDENNKLFGMKVIEDAGDSERLKAGQIISPRDL
RDENSILRREDKNLATARDVIPATANPVLQGITRASLQTKSFISAASFQETTKVLNEAAV
SGKIDELEGLKENVIVGHKIPAGTGMRRYDSIIVGSKEEFDEMLERKQEVNFN
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaataatgataaaaatacagtgcagaggtttaaccagatctctatcggttta
gcttctcccgagtccatcctcgcagaatctcgtggtgaagtcctaaaaccggaaaccatt
aactaccgtacgcacaagcctgagcgtgacggtttgttttgtgagcgtatttttggtcct
gtaaaggattatgagtgtgcttgtggtaaatataagagaatccggtacaaggggatcgtt
tgtgaccgctgtggtgttgaagttactgagaaaaaagtacgtagagaccgcgtggggcac
atcaaccttgttgttcctgttgcacacatctggtatttccgttctcttcctaacaaaatt
ggttatttgctaggacttccttccaagaaactggatatgatcatctactacgaaagatat
gtagtgatccagccaggtaatgcgaaggatgaagaaggaaagccgttgaaaaaaatggat
ttcttaacggaagaagaatatctgaacattttagatgaacttccacaggaaaaccaatat
ttagaagatagcgatccaaataaattcatcgcgaaaatgggtgctgaatgtcttatcgag
atcttgaaaagaatcgatcttgatgagctttcttatgaattgagacataaagcgaataac
gaaacttccaaacaacgtaaaactgaagctcttaagagactacaagttgtggaagctttc
cgtgatgcgaatgaaaaccgcgagaaccttccggagtggatgatcatgaaggttgttcct
gtgatcccgccagaattgagaccgttagtgcctcttgatggtggtcgtttcgcaacttca
gatttgaacgatctttaccgtcgtgtaattattcgtaacaaccgtctgaagcgtttaatg
gagatcaaagctcctgaagtaatcctgcgtaacgaaaaacgtatgcttcaggaatctgta
gactccttattcgataatacaagaaaatcatcagcagtaaaaactgattctaaccgtccg
ttgaaatcactttcagattcattgaaaggtaaacaagggcgtttccgtcagaacctgctt
ggtaagcgtgtggattattcggcacgttcggtaatcgttgtaggaccagaattgaagatg
tacgagtgtggtcttccgaagaatatggcggcagagctttacaagccttttatcatcaga
aaactgatcgaaagaggaattgtgaagaccgtgaaatctgccaagaagattatcgataaa
aaagaacctgtagtttgggatattctggagaacgtattgaagggtcatccggtattattg
aaccgtgctcctacgcttcaccgtctgggaatccaggcattccagcctaaacttattgaa
ggtaaggcaattcagcttcacccactagcgtgtacggcattcaacgccgatttcgatggt
gaccagatggcggttcacttgccacttggaccagaagcgattctggaagcacagttattg
atgctggcttctcataacatcctgaaccctgcgaacggttcaccaattacagtaccatct
caggatatggttttgggtctttattatatgaccaagcataagaaatctactgatgaggaa
ccagtaaaaggtgaaggattgactttctattctgcggaagagctggtaattgcttataac
cagaagaaagtagacctgaacgcaggtatcaagatcagaacaaaagattataacgataaa
ggagaactggtttaccagattatcgacaccactgttggtagagtacttttcaacgaaaca
gtgcctgaaatagccggtttcatcaacgaggtactgaccaaaaaatcgcttcgtgagatc
attggtaagatccttagaaatacaagcgtgccagaaactgcagatttccttgataagatc
aagggtctaggttatggttttgcattccgtggaggtctttctttcagcctgggtgatatt
atcattcctgcagagaaacaatctatgatcgacgaggccaatgaacaggtggaagcgatc
atcggaaactataatatgggattgattaccaacaacgagcgttacaaccaggtaattgat
atctggacgtctaccaatgccggtctaaccgaattggcgatgaaacgtattcgtgaagat
aagcaaggattcaactcggtatatatgatgcttgattccggagcccgtggtagtaaagag
cagattcgtcagcttaccggtatgcgtggtctgatggccaagccgaagaagtcaaattcc
ggtggaggtgaaattatcgaaaacccgattctttcgaactttaaggaaggtctttcgatt
ttggaatactttatctctactcacggtgcgcgtaaaggtcttgccgataccgctcttaaa
acggccgatgctggttacctaacccgtcgactggtagatgtttctcaggatgtgatcgta
aatgaagatgactgtggaactttacgtggagtagaagtgcgcccattgaagaaaaacgaa
gagatcgtggaatctcttggtgaaagaattttgggacgtatttccttaaatgatgtatac
gatccttcaactgaagaattgttagttgcggctaatgaagagatcacggaagagattgtg
aagaaaatagatgcagcgccaatcgaaagcgtagaagtacgctctccattaacttgtgag
gctaagaaaggtatctgtatcaagtgttacggtcgtaacctggctaccaataagatggtt
cagacaggtgaggcagtaggtgtagtggccgctcagtctattggtgagcctggaacacag
cttacactgcgtacattccacgtgggaggtattgcaggtaacatttctgaagaaaaccga
ctggaagccaaattcaacggtatcgctgaaattgaagatctgaaagtagttcagggagaa
gctcctgatggaggtacttctgaaatcgtgatttctcgtactgctgaagtgaagatcaag
gataagaaaaccggagtggttcttagtaacaacaacatcccttacggtgcgtctatcaat
attgaagacggagctgaagtgaagaaaggcgatgtgatctgtacctgggatccatataac
ggtgtgattatttctgaatttgctggtaagatcaagtatgagaatgtggaacaaggtata
acataccaggttgagatcgatgagcaaacaggattccaggaaaaagtaatttctgaatct
cgtaacaagaaattgattccaacgcttcacattcttggtaagaaagatgaagtgatccgt
tcgtacaacctgccagtaggtgctcacctgatggtagataacggcgagaagattggcgta
ggtaagattttggtgaagattccacgtaaatcctctaaagcgggtgatattaccggtggt
cttccaagggtaaccgaacttttcgaagcacgtaacccatcgaacccggcagttgtttct
gaaatcgacggtgtggtatcattcggtaagatcaagcgtggtaatcgcgagatcatcgta
gaatcgaaactaggagagattaagaaatatcttgtaaaactttctaaccagatcctggtt
caggaaaatgactacgtgagagctggtatgccactttcagatggttccatcactccggaa
gatattctgaacattaaaggacctaacgcggtacaacagtatcttgtgaacgaggttcag
gaagtttatagacttcagggtgtgaagattaatgataagcacttcgaggttgtagtaaga
cagatgatgcgtaaggtacagatcgtggatccgggagataccatcttcctggaaaaccag
ctggttcacaaagatgatttcatcgatgagaataacaagttattcggaatgaaggtgatt
gaagatgccggtgattctgaaagactgaaagccggacaaatcatttctcctagagatctt
agagatgagaactccattctgagaagagaagataagaacctggcgactgcaagagacgtg
attccagcaacagcgaatccagttctgcagggtattaccagagcatcacttcaaaccaag
tcgttcatctcggctgcatccttccaagaaactacgaaggtgttgaacgaggctgccgtt
agcggtaagatcgatgagcttgaaggattgaaggaaaatgtaattgtaggacacaaaatt
cctgcaggtacaggtatgagaagatacgatagcattattgtaggttctaaagaagaattc
gacgaaatgctggagagaaaacaggaagtgaattttaactaa
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