Gimesia fumaroli: Enr17x_01030
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Entry
Enr17x_01030 CDS
T09837
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gfm
Gimesia fumaroli
Pathway
gfm03420
Nucleotide excision repair
gfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Enr17x_01030 (pcrA_1)
03430 Mismatch repair
Enr17x_01030 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfm03400
]
Enr17x_01030 (pcrA_1)
Enzymes [BR:
gfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Enr17x_01030 (pcrA_1)
DNA repair and recombination proteins [BR:
gfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Enr17x_01030 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Enr17x_01030 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_12
CarD_TRCF_RID
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
QDV48094
UniProt:
A0A518I4Q8
LinkDB
All DBs
Position
complement(120559..122823)
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AA seq
754 aa
AA seq
DB search
MDFQQVLTPPQYAAVSHHQGPLLVLAGPGSGKTRVITHRIASLIHAGIPQHQILGITFTN
KASDEMGERVRQLIPDSRVEISTFHKFCVRILRRYGNVVGLDSNFSIFDTTDQHQLIRYV
LNELDIDTVAYNPSTIASMISRAKNDLITAERFVEAFQESIGDHLQAVAARVYPVYQKLL
LESNAVDFDDLLLHVASLLKGSPELRATLDERYQYILVDEYQDTNLAQYQIVMGLSLNTR
NLCVTGDPDQSIYGWRGAKIENILQFERDFPDCKTIRLEQNFRSTKAILRVADDLISHNQ
RRKPKTLFTENQEGTPVELLCFSDERQEANEIALHIRNTVDRGDYDFTDFAVFYRVNSLS
RELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLINNPDDRVAFSRIVNKPLRGIGK
ATQNKLIRWAEEKGFSLLEAAHQAKDCPALSKRASNMVARFAKMISGFSMADSGSVAHLM
EAVIDSTRLIDSWKESPDEEDQQRISNVNELLSTARKYDEIFGEETNLEGFLEASTLASA
TDQLDSNAGRVTLMTLHAAKGLEYPVVFIVGVEQNLIPHERVLREEFRDGLEEERRLFFV
GITRAEQCLYLTQTRERSLRGRPWRTITSDFLKEIDVDVKDQTDNMFETKSHFDEFVESI
KRGEVDTEALKAATPKRPLLMTGADLLKQTPEAADIPQGFSVGMRVRHPRYGVGTVMGIS
GYARKRTVDVLFDDADESQTFRVAHCPLQPLGLR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
ttggattttcagcaggtcctgacgcctccgcagtatgcggcggtctcacatcatcaaggc
cccttactggtcctggctggtcccggctccgggaaaacacgtgtgattacccaccggatt
gcctcgctgattcacgctgggattcctcaacatcaaatattagggattaccttcactaat
aaagcttcggacgaaatgggcgaacgggtacggcagttgattccggactcacgtgtggaa
atttcgacctttcacaaattttgtgtgcggattctgcgacgctatgggaacgtcgtcggc
ctggacagcaacttctcgatttttgatacaacggaccagcatcaattaattcgttatgtt
ctgaatgaattagatattgataccgtcgcctataatccgtcaaccatcgcctccatgatc
agccgtgctaagaatgacctgatcacagcagaacgatttgtcgaagcgtttcaggaatcg
atcggcgatcatctgcaggctgtcgcggcacgcgtctatccggtttaccaaaagctgtta
ctcgaatcgaatgccgtcgactttgacgatttgttattgcacgtcgccagccttctgaaa
gggtcgcctgaactccgggcaacgcttgatgagcgctatcaatatattctcgtcgatgaa
tatcaggacacgaacctggcgcagtatcagattgtgatggggctctctttaaacacccgc
aatctctgtgtgaccggcgatcccgaccagtcgatctacggctggcgtggtgccaaaatt
gaaaatattttgcagtttgaacgtgatttcccggactgtaaaacgattcgcctggaacag
aactttcgcagcacgaaagccatcttgagagtcgccgacgatctgatttcacataatcag
aggcgtaaaccgaaaaccctgtttaccgaaaatcaagaaggcacgcccgttgaattgctc
tgcttcagcgacgaacggcaggaagccaacgagattgccctccatattcgaaacaccgtc
gatcgaggcgattatgatttcaccgatttcgctgttttctaccgtgtgaattcgctttcc
cgagaactggagctagctctggcacgccataaaattccgtatcaactcgccggtagtgtg
gccttttacgagcggaccgaagtcaaagacctgctgtcgtatctgaaattaatcaacaat
cctgacgaccgcgtcgcgttttcccggattgtgaataaaccactaaggggcatcggcaaa
gccactcagaacaaactgattcgctgggcggaagaaaaaggcttcagcctgctggaagcc
gcgcatcaggcgaaagactgccctgcgctttccaagcgtgcctcgaatatggtcgcccgt
tttgcaaaaatgatctccggtttttcaatggctgactccggttcggtggcgcatttaatg
gaagccgtcatcgacagcacgcgcctgatcgacagctggaaagaaagtcccgatgaagaa
gaccagcaacgtatctccaacgtgaatgagttactctcaacggcacgaaagtatgacgag
atcttcggcgaagaaacgaatctggaaggctttctggaagccagtactctggcgagtgct
accgaccagttagactcgaatgccgggcgcgtcacgctcatgacattgcacgcagccaaa
ggtctggaatacccggttgtctttattgtgggagtggaacaaaatctgattccccacgaa
cgcgtattgcgcgaagaatttcgcgatggcctggaagaagagcggcggctgtttttcgtc
ggcatcactcgggcagaacaatgcctgtacttaacgcaaacgcgcgagcgttctctcaga
ggccgtccctggagaaccattaccagcgatttcctgaaagagatcgacgtcgatgtcaaa
gatcagacggacaatatgtttgaaacgaaatctcactttgatgaatttgtcgagtccatc
aaacgcggcgaagtcgataccgaagcattaaaagcagcgacccccaagcgcccactgttg
atgacgggggccgacctgttgaaacagacgccggaggccgccgacatcccacaagggttt
tctgtgggaatgcgcgtcaggcatccgcgttatggtgtgggcaccgtcatgggaatcagc
ggctacgcccgcaagcgcacagtcgatgtgctgtttgatgatgccgatgaaagccagacc
ttccgcgtcgcccactgccccctacaaccgttgggactgcgataa
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