Gimesia fumaroli: Enr17x_24470
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Entry
Enr17x_24470 CDS
T09837
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
gfm
Gimesia fumaroli
Pathway
gfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Enr17x_24470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfm03021
]
Enr17x_24470
03019 Messenger RNA biogenesis [BR:
gfm03019
]
Enr17x_24470
Transcription machinery [BR:
gfm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Enr17x_24470
Messenger RNA biogenesis [BR:
gfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Enr17x_24470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Spore_III_AA
S1CSD-TOTE-2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDV50407
UniProt:
A0A518IBC7
LinkDB
All DBs
Position
complement(3060155..3061783)
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AA seq
542 aa
AA seq
DB search
MAAKSSETSDKPKPTRRRTTKSRKKVEPATTEDTFEKSESDALQDEYHRKAEENLELFEN
SHSSQSEAEPEREPVSMSDNPAESVGENNSEQTDGDRSEKTGGNRRRRRRRRKSDGTNNA
QGQNQGRQGGGGNRGRSNNRGGGGGGRSRSGGTGGRTQSRRPRSTSNAANENISGTIEGV
LELHPKAYGFIRDPKSNYKAQDSDAFVSSSLIEKHNLREGILIRGEVGPGTRGQGPRLKS
IETIDGRTIEEYMEIKSFDELTPINPFEQIKLETGPMPITMRIMDLLTPIGKGQRALVVA
PPRTGKTMLLQDIAEAVSKNHPEVRLMVLLIDERPEEVTEMERSIKGEVISSSMDRDVES
HVRTSQLIFERGKRLAEAGEDAFILLDSITRTARAFNKWVGNTGRTMSGGLDVKAMDIPK
KMFGTARRFDEGGSLTVLGTALIDTGSRMDEVIFQEFKGTGNMEMVLSRELSDRRIFPAI
DITLSGTRREEKILDPEVLEGVTMLRRSLISLSPVEAMEQLSSTLKKFPTNKEFLEKIRA
IL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaaagttctgaaacttctgacaaacccaaaccaacacgtcgaagaacaacg
aaatcacgcaaaaaagtggaacccgctacaacagaagacacttttgaaaaaagtgaatcg
gatgccctgcaagacgaataccatcgtaaagcagaagaaaatctcgaactattcgaaaac
tctcattcatctcagagtgaagcagaacctgaaagagaacctgtaagtatgtcagacaat
cctgctgaatccgtaggcgaaaataactcagaacaaactgatggcgaccgatctgaaaaa
acaggcggtaatcgacgcagaagacgtcgcagaagaaaatctgacggcaccaacaacgca
cagggacaaaatcagggacgccagggaggcggtggaaatcgaggccgctcgaataacaga
ggcggaggtggaggcggccgctctcgctctggagggactggcggacgaacacaatctcga
cgtccgcgttcaacttcaaacgcagccaatgaaaatatctccggaaccattgaaggggtc
ttggaacttcaccccaaagcatacggctttattcgagatcccaaatcaaattacaaagca
caggactcagacgcgtttgtctccagctccctgatcgaaaaacacaatctccgcgaaggt
attttaattcgaggagaagtcggccccggaaccagagggcagggaccacgactcaagagc
attgaaaccattgatggtcgcaccatcgaagaatacatggagattaaatccttcgacgaa
ctgactcccatcaaccctttcgaacagatcaaactcgaaacaggtcctatgcccatcaca
atgcgcatcatggatctgctcactccgatcgggaaagggcaaagagcacttgttgtcgcg
cctcctcgaacaggaaaaacgatgctcttacaggacattgcggaagcagtcagtaaaaac
catcccgaagttcgcctgatggtgttattgatcgatgaacgtccggaagaagtcacggaa
atggaacgctcaatcaaaggcgaagtcatctcctcatcaatggaccgggacgtcgaaagc
catgttcgtaccagccagctcatttttgaacgtggtaaacgcctggccgaagcgggagaa
gatgccttcatcctgctggacagtatcacgcgaaccgcacgtgccttcaataaatgggtt
ggcaacactggacgtaccatgagtggtggtctggatgtcaaagcgatggatattcccaaa
aagatgtttggaaccgcacgtcgctttgatgaagggggctctctgacggtgctgggaacg
gcactgattgacacaggcagccgcatggacgaagtcattttccaggaattcaaagggacc
ggtaatatggaaatggtgctcagccgggaactctccgaccgccgcatctttcctgcgatt
gacatcactctttccggaacccggcgtgaagaaaaaattctggatcccgaagttctcgaa
ggtgtgaccatgctccgcagaagtctgatttcgctcagccctgttgaagcaatggaacaa
ctcagcagtacactcaagaaatttccgacgaacaaagaatttctggaaaaaatccgggcg
attctttag
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