Gimesia fumaroli: Enr17x_28030
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Entry
Enr17x_28030 CDS
T09837
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
gfm
Gimesia fumaroli
Pathway
gfm02020
Two-component system
gfm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Enr17x_28030 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Enr17x_28030 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfm03021
]
Enr17x_28030 (rpoN)
Transcription machinery [BR:
gfm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Enr17x_28030 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_23
LacI
SF3b1
DUF2203
Motif
Other DBs
NCBI-ProteinID:
QDV50760
UniProt:
A0A518ICJ9
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All DBs
Position
3526097..3527587
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AA seq
496 aa
AA seq
DB search
MHLNISQQMKLGQQMKLAPRMIQSMEILQLPLQALEERIDQELAENVCLERISDNENTPD
TESELMRDQANAESNSSDLDEKEMVAGSEQNNESDFERLLEMAEQWPEDNVTSATKPSSN
RVSDDMERSNDAIANISERQQTLNEYLLEQFHYFNCPAEIKEFGEYLIQNLDHNGRLQSS
LPEIVQVYGKHITQEQAEAALQLIQKCDPPGVGARDLKECLLLQLKPDAPFRDVLVTLIT
SHLEDLGQNRLPVIQRKTGYSIDMIKNAMSYLRYLDPFPGRGFESEPVLKVTPDVFVKLD
ENGKYVVELENEYTPPLRISRRYAQLLRNKTDDQTKEYIKKKIDAAKWLIEAIEQRHSTL
KRVAQAIVDFQTDFLNNGPEHIVPLKMQQIADVVGVHVTTVSRAVDDKWIQTPRGLYPLK
RFFGGGTKTSEGEDVAWGIIRLKLKEIIDAEDKNKPLSDDSLVEALSKEGYNLARRTVTK
YRKAMNIPSSRQRREY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaatatttcacaacaaatgaaactgggccagcagatgaagctggctccgcga
atgatccagtcgatggagattctgcagctccccttacaggcgctggaagaacgaatcgac
caggagctggcagagaacgtctgcctggagcgtatcagcgataatgagaatacgcccgat
accgaatcagagttaatgcgggatcaggcaaatgcagaatccaacagctctgaccttgat
gaaaaagagatggtggctggcagtgagcagaataacgagtctgatttcgagcgtttgctg
gagatggcagagcagtggccggaagacaatgtcacttctgctacaaagccatcgtctaat
cgagtcagtgacgatatggaacgcagtaacgatgcgattgccaatatctcggaacgtcag
cagaccctgaatgaatatttgctggaacagttccattactttaattgcccagccgaaatc
aaagagtttggcgagtatctgattcagaacctggatcataatggccggttgcaaagttcc
ctgcctgagatcgtgcaggtttacggcaaacacattacgcaagagcaggcagaagccgct
ctacaactgattcaaaaatgcgatccccccggtgtgggggcccgtgatttgaaggaatgc
ctcctgcttcagttgaagcccgatgccccctttcgtgacgtgctggtgacgttgattacg
tcgcacctggaagacctggggcagaatcgactgccggtgattcaacgaaaaaccggttat
tcgatcgatatgatcaagaacgccatgtcctatttacgttatctggatccgtttccggga
cgtggattcgagtcggaaccggttttaaaagtgacgcctgatgtttttgtcaaacttgat
gaaaacggaaagtatgtggttgagctggaaaatgaatacacgccccccttgcggatcagc
cggcggtatgcccagttgttacgaaacaaaaccgacgaccagaccaaggaatacatcaag
aaaaaaattgatgctgcgaaatggttgattgaagcgatcgaacagcgtcacagtacctta
aagcgggtggcacaggcaattgtcgattttcagactgattttctgaacaacggtcctgag
catattgtgcctttgaagatgcagcagattgctgacgtcgtgggcgtacatgtgacgaca
gtgtctcgcgctgtcgatgataaatggattcagacgccgcgtggtttgtatccgttgaaa
cgcttctttgggggggggaccaaaacctctgaaggggaagacgtggcctggggcatcatt
cgattgaagctcaaagagatcatcgatgcggaagacaagaataagcctctcagcgatgat
tctcttgtcgaagcactatccaaagaaggatacaatctggcacggagaactgtcacaaag
tatcgcaaggcgatgaatatcccttcctcacggcagcgtcgggaatattaa
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