Gimesia fumaroli: Enr17x_31620
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Entry
Enr17x_31620 CDS
T09837
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gfm
Gimesia fumaroli
Pathway
gfm03410
Base excision repair
gfm03430
Mismatch repair
gfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Enr17x_31620 (recJ)
03430 Mismatch repair
Enr17x_31620 (recJ)
03440 Homologous recombination
Enr17x_31620 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfm03400
]
Enr17x_31620 (recJ)
DNA repair and recombination proteins [BR:
gfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Enr17x_31620 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Enr17x_31620 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Enr17x_31620 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QDV51110
UniProt:
A0A518IDH8
LinkDB
All DBs
Position
complement(3946258..3948021)
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AA seq
587 aa
AA seq
DB search
MTQKWRFAPHDESQIRGLSSEMRISPLLAQVLIARGLRDALSARSFIDARMSELLDPCSM
PGVDDAADRVIAAINAKRRITIYGDYDVDGMTATSILLQCITLANGQCDYFIPNRLDDGY
GLNCDAVQKLYEEDPQRLLITVDCGITSVKEAALAKELGLELIITDHHQMGDELPDADCL
VHPRLPDSSYEFPHLCGAGVALKLAWAVCQKLGDGQKASPKMREYLKCAVGLAAIGTIAD
VVPLLGENRILVRYGLGALTELAPMGLLELMKVAEIKSGQTLDTEDIGFALAPRLNAAGR
LGQARLAVELLTTTNQDRATQLAAYLDELNKNRRTVERRILKQAREMVEENEEWNDHPTL
VLAHQDWHPGVIGIVANRVAEHFEKPTVLIALDANSRTGQGSARSFAGFDLHAGFSSCAA
HLTRYGGHQAAAGLKIEEDKVNDFRLAFAEYAVSAPQPSDHDLQVRIDAEVCLNEITKQS
VRELDCLGPFGQENPRPQFVATRVELAEPPRTMGEGGRHLSLVFQQHNTKIRAIAFGKGE
WASQMEEDGGPFSISFAPGINRFRGFESVQLQLKDWVSEKSKTPVTS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaaatggcgatttgctccccacgatgaatctcaaatacgcggcctcagttct
gaaatgcgcatctcaccgcttctggctcaggtcctgatcgcacgagggcttcgggacgca
ttatctgcacggagttttattgatgcccgtatgagtgagcttctggatccctgttccatg
ccaggcgtcgatgatgctgccgatcgagtcatcgcagcgatcaatgcaaagcgacgtatt
accatctacggcgactacgacgtcgacggcatgaccgccaccagcattttactccaatgt
atcactctggcgaatgggcagtgtgactactttatccccaatcgtctggatgatggttat
ggtttaaactgtgacgccgtccaaaagttatacgaagaggatccccagcgattactgatc
accgtggattgtggaatcaccagtgtgaaagaggcggcacttgccaaagaattaggcctg
gagctgattattaccgaccatcatcagatgggggacgaacttccggatgcggattgcctg
gttcatccgcgtttaccagacagtagttatgaatttccgcatctatgtggtgcaggggtt
gccttgaaactggcctgggcagtttgtcaaaaattgggagatggtcagaaggcatccccc
aaaatgcgtgagtatttaaaatgtgccgtcggactggctgctattgggactattgctgat
gtcgttcctttactgggcgagaatcggattctcgtccgttacggactgggagcccttact
gagcttgctccaatgggattactggagttgatgaaagtcgcagagattaaatctggccaa
acgcttgataccgaagacattggtttcgcacttgcgccccgattgaatgcagcgggaaga
ctagggcaggcccgactggctgtggaactgttgacaacaactaatcaggatcgcgctaca
cagttagccgcttatctggatgaattaaacaaaaaccgcagaactgtagaacgccggata
ttaaaacaagccagagagatggtggaagagaatgaagaatggaacgatcatccaacatta
gttctggcacatcaggactggcatccgggagttatcggaattgtcgccaatcgagtggca
gaacactttgaaaaaccgaccgtgttgattgcattggatgccaattctcgcaccggtcag
gggtctgcacggtcatttgccggctttgatctacatgccggcttctcatcctgtgctgcg
catttaacccgctatggtggtcaccaggctgcagctgggctcaaaattgaagaagacaaa
gtcaacgactttcggctggcatttgctgagtatgctgtgagtgcgccccaaccctctgat
catgacctgcaggtacgcattgatgcagaagtttgcttgaatgaaatcacaaaacaatcc
gtgcgggaactggattgcctggggccgtttggccaagagaatccccggcctcaatttgtg
gcaacgcgtgttgaactggcagaacccccgcgaacaatgggagaaggggggcggcatctt
tccctggtctttcaacaacacaatacaaaaatacgagcgatcgcatttggaaaaggggaa
tgggccagtcagatggaagaagatggtggtccgttttcaatcagttttgcaccggggatt
aatcgctttcgcggctttgaaagtgtgcaactgcaattgaaagactgggtctctgaaaaa
tcaaaaactccggtcacatcctga
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