KEGG   Gimesia fumaroli: Enr17x_33730
Entry
Enr17x_33730      CDS       T09837                                 
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
gfm  Gimesia fumaroli
Brite
KEGG Orthology (KO) [BR:gfm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfm03400]
    Enr17x_33730 (rhlE_2)
Enzymes [BR:gfm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Enr17x_33730 (rhlE_2)
    5.6.2.6  RNA 3'-5' helicase
     Enr17x_33730 (rhlE_2)
DNA repair and recombination proteins [BR:gfm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Enr17x_33730 (rhlE_2)
SSDB
Motif
Pfam: DEAD_assoc DEAD WHD_Lhr WHD_4th_Lhr Helicase_C WHD_3rd_Lhr ResIII Cas3-like_C_2 AlkZ-like HTH_IclR HTH_Crp_2 DEXQc_Suv3 HTH_5 ThsB_TIR
Other DBs
NCBI-ProteinID: QDV51318
UniProt: A0A518IE12
LinkDB
Position
4265831..4270423
AA seq 1530 aa
MSFYGYHPIIEKWFQNRFQGPTEPQQQGWPCINRGEHTLISAPTGSGKTLTAFLSVIDRI
VKRSLDGELENEISVIYVSPLRALSNDMHRNLTEPLEEISQLLEEEGYTFTPIRVGLRTG
DTPSSKRAALVRRPPHILVTTPESLYLMLTGSKSRETLKTVETVIVDEIHALLRDKRGSH
WSLTLERLEALVDHPLQRIGLSATQKPLERVAQYLVGNRPEIEITEELPQTSDNELPEQT
CRIVNIGHSRTLDVAIQVPPSELSAICSHEQWAEVLEQIIELIQSHHSTLIFVNTRRLAE
RITHQLTERLGEDVVGSHHGSLSAKIRHRTEQKLKSGELKAVIATASLELGIDVGYIDLV
VQIGSPRGIATFLQRIGRSGHSLGLVPKGRIFALSRDELLESMALVRSIKQGILDTVRMP
EAPVDILAQQITAEVACEEWNTDKLFETVTRAYSYRNLKRSVFDSTVQFLSEGISTTAGR
SRVYLHHDQVQSRVRSRKNARLVSTMNGGAIPEIASYRVVTEDDQTVVGSVDEDFAVESM
AGDIFLLGNTSWQIRYVRGGDVTVVDANGAPPSIPFWFGEAPGRSLELSTEISHLREELE
RQIENPEQAILWLSQETNTDEWGSKQIVDYVQTEKAALGIIPTQKRIVFERFFDESGGMQ
LVIHAPFGGDINRAWGYTMRKRFCRSYNFELQATADDNGIILSLGPQHSFPLESLFTMLN
TRNVQQLSEQAILDHPMFHVRWRWNVTRALLVSRMQNGKKVPPPLQRFRAEDLLTAVFPR
LTGCPENEIGEIVRPDHILVDQTLYDCLNEQLDIEGFKTVLQEIEQGTVKLIPRDTREPS
PFCYELLNSSPYTFLDGGEAQERRARAVATRHTLSIESVEDLGRLSPEAIAQVCQEAQPL
VRNADEFHDLLLGRIHIPINEQPDWADWYQELEATGRATTLQRTENQSANRCTESWVATE
RLPAALAAFPESQHAPPVTVPVGVRQEWESAEARTAIIRGLLDTCGPLTVAEIANLAGMT
DSQTEAALMALEGEGIAMQGFFRVKDPNWDQSVDDSAKEKETTPANALPKEWCHRRLLAR
IHRLTLQGLRAQVQPVDTTVFIQYLTRLHGMSGDEKRSGTNGLFEILSMLQGIDIPAICW
ERDILPARLSNYQNNQLDELCFTGEIGWGRLYPPKRTADQGKPMTGITRNAPVSFFLRED
IPWLTYFSEASTQNTEDQNYLSSPAVEIQELLTQQGALFATDLMAATESLPTQVADALGE
LISRGLVTSDSFSGMRQFTQDRSTKNRRAARKSRIGLVRKRSTPNNTGRWSIWRRELAAE
IEERSLQYYEYVEQWAWQLLRRWGVVFRDLLVKESGAPRWFELLQIYRRLEARGEIRGGR
FVSGVAGEQFAMSGTIQELRKLRDESATDALTILSAADPLNLVGILTKQARIPSTANNRL
AYWNGSLIAYSRSEELFLLANVNEKTKRELILGFGLPIHGTNINETATAGSKPAIEPLEH
QPAATENELLIPNSNSTEKEEKRSPRPSFL
NT seq 4593 nt   +upstreamnt  +downstreamnt
atgtcattttacggttatcacccgatcattgaaaaatggtttcaaaatcgcttccagggt
ccgacagaacctcaacagcaaggctggccttgtatcaatcgtggtgagcacactctgatc
tcggcccccaccggaagtggtaaaacactaaccgcatttctgtctgtgatagaccgtatc
gtgaaacgttctctggatggagagctggaaaatgaaatctcggtgatctatgtctccccg
ttacgggcactctcgaatgacatgcaccgcaacctgacagagcctctggaagaaatctca
cagctattggaagaagaaggctacacattcactcccattcgcgttggcctgcgaacaggc
gacaccccttcttcgaaacgagcagcactcgtccggcggcctcctcatattctggttacc
actccggaatccctctatttaatgttgaccggatccaaaagccgggaaactctgaaaacc
gtcgaaacggtcatcgtagatgaaattcacgccctgctgcgggacaaacggggctcgcac
tggtcacttaccctcgaacgcctcgaagcattagttgatcatcctctacagcggatcggt
ctgtccgccacacaaaaaccgctggaacgggtggcacaatatctggtcggaaatcggccg
gaaattgaaatcactgaagagctacctcaaacatcagataacgagcttcccgaacaaacc
tgccgcatcgtcaacattggtcattcccgcacgctagacgtcgccatccaggttccccca
tcggaattgagtgcgatttgttctcacgaacaatgggctgaagtactggaacagatcatc
gaactgatccaatcgcatcacagcacactaatctttgtcaatacgcggcggttggccgag
cgaattactcatcagttaaccgaacgcctgggcgaagacgtcgtcggcagccatcacggt
tccctctctgcaaaaatcagacatcgcacggaacaaaaactgaaaagcggcgaactcaaa
gccgttatcgcgaccgcctcactggaactgggaattgatgtcggctacatcgatctggtt
gtgcagatcggctccccccgtggcatcgctacttttctccagcgcatcgggcgatcagga
cactctctcggactggttcccaaaggacgcatctttgccctctcgcgggatgaactactg
gaaagcatggcgctggtccgatcgatcaaacaaggtatcctcgataccgttcgtatgccg
gaagcccctgtggatattctagcacaacaaatcaccgccgaagtcgcctgtgaagaatgg
aacacggacaaattattcgaaacagtgacgcgcgcctattcttatcgaaacctgaaacgg
tccgtctttgacagcacagttcaatttctgagcgaaggcatcagcaccacggccggccgt
agtcgcgtctatctacatcacgaccaggtccagagccgtgtccgtagcagaaaaaatgcc
cgcctcgtctccacgatgaacggaggggcgattccggaaatcgcctcgtatcgcgtggtc
accgaagacgaccagaccgtggtcggttcagtcgacgaagactttgccgtcgaaagcatg
gcaggtgacatttttcttctaggcaatacctcgtggcaaattcgctatgtccgtggcggc
gatgtcactgtggtcgatgccaacggcgcgcccccttctatccccttctggtttggtgaa
gccccgggacgctcccttgaactctcaaccgaaatatcgcacctgcgcgaagagcttgaa
cgccagatcgaaaacccggaacaagccattctctggctgagtcaggaaaccaatacggac
gagtggggcagcaaacagattgttgattacgttcaaacagaaaaggcggcgctgggcatc
atcccgactcaaaagcgcattgttttcgagcgattctttgatgaatcagggggcatgcaa
ctggtgatccacgctccctttggtggcgatatcaatcgtgcctggggttacaccatgcgt
aagcgtttctgccgctcttataattttgaactgcaggcaaccgccgacgataatgggatt
atcctctcgctcggcccacagcatagcttccctctggagagtctgtttacaatgttgaat
accagaaacgttcaacaactctctgagcaggcgattctggaccaccctatgtttcatgtc
cgctggcgctggaatgtgacccgggcattgctggtctcacggatgcagaatggtaaaaaa
gtaccgccaccgctccaacgttttcgagccgaagacctgctcaccgctgtgttcccgcgt
ctgactggttgtcccgaaaatgaaattggggaaatcgtccgccccgatcatattctggtc
gaccagacattgtatgactgcctgaatgagcaactcgatattgaaggcttcaaaaccgtg
ctccaggaaatcgaacaggggaccgtcaaactgattccccgcgataccagagagccttct
cctttttgctacgaactattgaactccagcccgtatacgtttctggatggtggcgaagca
caggaacgccgcgcccgtgcggtcgcaacacgccacacactttccatcgaaagtgtcgaa
gacctgggcagactctcccccgaagcaatcgcacaggtttgccaggaagcacaaccactg
gtacgaaacgccgatgaattccatgatctgctactggggcggattcatattcccataaat
gaacagccggactgggccgactggtatcaggaactggaagcaacgggccgtgcgacaaca
ctacaaagaacagagaatcaatcagcgaaccgctgcaccgaaagctgggtcgcaacagag
cgtctcccggcagcactggctgccttccccgagagccagcatgcaccgcctgtcaccgtt
cctgttggtgtgcgtcaggaatgggaatcggcagaagcccgcaccgccattattcgcggc
ctgctcgatacttgtggcccgttgaccgtcgcagaaatcgccaatctagcaggtatgacc
gattcgcaaaccgaagcggcactgatggcgctcgaaggcgaaggcatcgccatgcaaggc
ttcttccgtgtcaaagatcccaactgggatcaaagtgtagatgattctgccaaagaaaaa
gaaaccactcccgccaacgcccttcccaaagagtggtgtcaccgacgtttgctggcccga
attcacagactcactctacaaggattgcgtgcgcaagtgcagccagtcgatacgactgtc
ttcattcaataccttacacggcttcacggcatgtcgggtgacgaaaagcggtcgggaaca
aacggcctatttgaaatcctctccatgctccagggaatcgatatcccggcaatttgctgg
gaacgcgacatcctgccggcccgactttccaattaccagaataatcaactcgacgaactc
tgctttacaggcgaaattggctggggacgactctatcctcccaaacgaaccgccgatcaa
ggcaaaccgatgactggcattactcgcaatgcccctgtctcattctttttaagagaagat
attccctggctgacgtattttagtgaggcgtcaacgcagaacaccgaagaccagaattat
ttgagcagcccggctgtagaaatccaggaactactcacgcaacagggggctctgttcgcc
accgacttaatggctgcaacagaatcccttcccacacaggtcgccgatgcattgggagaa
ctcatctcccgcgggttagtgacctccgacagcttctccggtatgcgacagtttacccag
gaccgttccactaaaaaccgccgagctgcccgcaaatcaagaatcggtctggtacgcaaa
cgcagcaccccgaacaatacaggacgctggtcgatctggcgacgtgaacttgcggctgaa
attgaagaacgcagcctgcaatattatgaatacgtcgagcaatgggcgtggcagttgcta
agacgctggggagtggtcttccgcgatttgttggtgaaagaatcgggtgccccacgctgg
ttcgaattactgcaaatttatcgacgtctcgaagcccggggagaaattcgcggcggtcgt
ttcgtatctggagtcgcaggggaacaatttgcgatgtcgggaacgattcaggaattgcgg
aaactccgtgatgaatcagcgaccgatgcgctgacgattctttccgccgccgacccgttg
aatctcgtgggaatcttgacgaaacaggcgcgcatccccagcactgctaacaaccgtctc
gcttattggaatggaagtctgattgcctattcgcggagcgaagaactgtttttactcgca
aacgtcaatgaaaaaacaaaacgcgaactgatcctgggatttgggcttcccatccacggt
acgaatattaatgaaacagccacagctggttcaaaaccggccatcgaaccactagaacat
caacctgctgctacagagaacgaactgttaatccccaatagtaacagcactgaaaaagaa
gagaaaagatcgccacgcccttcctttctctaa

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