Gimesia fumaroli: Enr17x_34950
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Entry
Enr17x_34950 CDS
T09837
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gfm
Gimesia fumaroli
Brite
KEGG Orthology (KO) [BR:
gfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfm03016
]
Enr17x_34950 (truB)
Enzymes [BR:
gfm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Enr17x_34950 (truB)
Transfer RNA biogenesis [BR:
gfm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Enr17x_34950 (truB)
Prokaryotic type
Enr17x_34950 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF2406
Motif
Other DBs
NCBI-ProteinID:
QDV51439
UniProt:
A0A518IEC3
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All DBs
Position
4438702..4439631
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AA seq
309 aa
AA seq
DB search
MSSKETATGLNLSGLLNLHKPPEVTSRQVVNQIQKRIKPVKVGHAGTLDPLATGILVVCL
GSATRLIRFVQDQPKEYVGEFILGKRSDTDDITGNVVDTPDCPPITREQLERCLPTFLGH
IDQVPPQYSAVHINGQRAYDLARQGKEFEIQPRTVEVYEIELTAFQFPQFQLRIVCGSGT
YIRSIGRDLGEQLGTGATMSSLVRTRIGQFGLDTAMKLDEELSLESITQHLQPAALAVTN
LPQYQCNERELMFLSQGRKLKCTPEHFPDTSQITEIAVISQEGALAAIAEWDQSLHQLSP
RQVYYQQSN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaaagaaactgcaacgggccttaatttatccggcttgctgaatctccataaa
ccacccgaggttacttcacgccaggtggtgaatcagatccagaaacggatcaaaccagtg
aaagtcggacacgctggtacactggatcctctggcgacaggcatattggtagtctgcctt
ggatcggcaacgcggctgattcgttttgtgcaggatcaacccaaagaatacgtcggcgaa
ttcatcctggggaaacgaagcgacacggatgatatcaccggaaatgtggtcgataccccc
gactgcccgcctatcactcgcgagcaactggagcgttgcttgccgaccttcctgggtcac
attgatcaggtccccccgcaatattcggcggtccacatcaacgggcagcgggcctatgac
ctggcgcgacagggtaaagaatttgaaattcaaccaagaacagtggaagtctacgaaatc
gaattaacggcatttcaatttcctcaatttcaattgcggattgtctgcggttcgggaacc
tacatccggtccatagggcgcgatctgggagagcaattaggaacgggtgcaacaatgtca
tcactggttcggacacggattggacagttcggtctggataccgcaatgaagctggatgaa
gaactctcactcgaatcgattactcaacacctgcaaccagcagcattagccgtcacaaat
ctgccgcagtatcagtgcaatgaacgggaactcatgtttctcagccagggacgcaagctc
aaatgcaccccggaacattttcctgataccagtcaaattactgaaattgcggtgatctct
caggaaggcgcactcgctgccatcgccgagtgggatcaatcgctccatcaactgtcaccg
agacaggtctattatcaacaatctaattaa
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