Gimesia fumaroli: Enr17x_40750
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Entry
Enr17x_40750 CDS
T09837
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gfm
Gimesia fumaroli
Pathway
gfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Enr17x_40750 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfm03019
]
Enr17x_40750 (deaD)
03009 Ribosome biogenesis [BR:
gfm03009
]
Enr17x_40750 (deaD)
Enzymes [BR:
gfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Enr17x_40750 (deaD)
Messenger RNA biogenesis [BR:
gfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Enr17x_40750 (deaD)
Ribosome biogenesis [BR:
gfm03009
]
Prokaryotic type
rRNA helicases
Enr17x_40750 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
HEM4
AAA_30
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QDV52016
UniProt:
A0A518IFZ9
LinkDB
All DBs
Position
5152651..5154525
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AA seq
624 aa
AA seq
DB search
MADSHLYLFSHEQFLFLTRRIRPASRLKVRRKVQCMSTDAPSQAKFTDLALCQPVLDSLE
ALGYQTPTPIQAQTIPHLLEGRDLVGQAQTGTGKTAAFALPLLSKIDLEVKAPQLLVLAP
TRELAIQVSESFKQYGSKLKGLQVLPIYGGADFKSQLQPLKRGVHVVVGTPGRVMDHMRR
GTLKMEDLRCLVLDEADEMLRMGFIDDVEWILEQMPPKHQTALFSATMPEAIRRIAVTYL
QSPEEITVKVKTRTADTINQRYWLAKGHHKLDALTRILEAEEVDGVIVFVRTKTITTELS
EKLESRGFLAAPLNGDIAQKQRERTVGRLKAGHVNIVIATDVAARGLDVTRISHVINYDL
PGDSEAYVHRIGRTGRAGRTGEAITFVSPRETRSLQTIERAIKHKIERMDLPAISKINER
RQERFKESITKAMKGPDFELFQKLLAEHQTESGNTELQIAAALACMYQGKRPLFLTEAPP
RKQRETSSGPGRDHSHSERPERPERRFQKDKERPRNRKTEDAPEEGMERFRIQVGHSHGV
KPGNIVGAIANEAELDSQYIGRINIFDDYSTVDLPEGMPRDIFQSLKTVWVSGQQLRISR
FEQAGAPVKRKRFKGKHKHKQQRV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctcacctgtatcttttttcgcacgagcaatttctatttttaacacgacgt
atacgcccagcctcccggctgaaggttcgtcgaaaggttcaatgtatgtcaacggatgcc
ccatcacaggcaaaatttacggatttagcgctctgccagcccgtcctggattcactggaa
gcgctgggatatcagaccccaactcccattcaggcacagacgattccccacctgctggaa
ggacgtgacctggttggccaggcccaaactggtacaggtaaaaccgccgcatttgcactc
cctttactttcgaaaatcgatctggaagtcaaagcacctcaacttttggtgctggccccc
acacgggaactggcaattcaggtttctgagtcatttaagcaatatggctcgaaactgaaa
ggtctgcaggtccttccgatctacggtggcgctgactttaaaagccagttacagcctcta
aaacggggtgtacacgttgtcgtgggaacccccggccgtgtgatggaccatatgcgtcgt
ggcacactcaaaatggaggatttgcgttgcctggtactggatgaagccgacgaaatgctg
cgaatgggctttattgatgatgtggaatggattctggaacagatgcctccaaagcatcaa
accgccctgttttcggcgactatgcccgaagccatccgccgcattgctgtaacctacttg
cagtctccggaagaaatcaccgtcaaagtcaaaaccagaaccgcagataccattaatcaa
cggtattggctggcgaaaggtcatcacaaactggatgctttgacccgtattctggaagcg
gaagaagtggacggcgtcattgtctttgtgcgaaccaagacgattacgacggagttgtct
gaaaaactggagtcgcgcggatttctcgctgctcctttgaatggagatattgctcagaaa
caacgagagcgaactgtaggccggctcaaagcgggccatgtaaacattgtcatcgcaacc
gacgttgcggctcgcgggttagacgtgactcgcatcagccacgtcatcaattacgattta
ccaggcgactcagaagcttatgtgcatcgtatcggtcgtacgggtcgtgcaggtcgtacg
ggtgaagcaatcactttcgtttctccccgtgaaacgcgctcactgcagacaatcgaacgt
gcgatcaagcataaaatcgagcgaatggatctgcctgcgatcagcaaaatcaatgaacgc
cgacaagagcgtttcaaagaatcgatcacgaaggccatgaaggggcccgattttgaactg
tttcagaagctgctggctgaacatcagaccgaatctggtaacactgaacttcagatcgca
gctgcccttgcctgtatgtatcaggggaaacgcccactattcttaaccgaggctcctccc
cgaaaacaacgggaaacatcatctggaccaggaagagaccattctcattccgaacgtcca
gaaagaccggaacgtcgcttccagaaagacaaagaacgtccccgcaacagaaaaaccgaa
gatgcaccagaagaaggcatggaacgctttcgcattcaggtcggtcacagtcatggcgtc
aaaccaggcaatattgtcggtgcgattgccaatgaagccgaactggatagccagtacatt
ggccggatcaatatctttgatgattacagtacggttgatctaccggaaggcatgcctcgg
gatattttccaatcattgaaaaccgtttgggtctctggccagcaattacgaatctcgcgg
ttcgaacaagcgggcgcaccagtcaaacgcaaacgcttcaaaggcaagcataagcacaaa
caacagcgagtttga
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