Gimesia fumaroli: Enr17x_40790
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Entry
Enr17x_40790 CDS
T09837
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
gfm
Gimesia fumaroli
Pathway
gfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Enr17x_40790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfm03021
]
Enr17x_40790
03019 Messenger RNA biogenesis [BR:
gfm03019
]
Enr17x_40790
Transcription machinery [BR:
gfm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Enr17x_40790
Messenger RNA biogenesis [BR:
gfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Enr17x_40790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
Mor
S1CSD-TOTE-2
DUF7877
Motif
Other DBs
NCBI-ProteinID:
QDV52020
UniProt:
A0A518IG10
LinkDB
All DBs
Position
5160449..5161882
Genome browser
AA seq
477 aa
AA seq
DB search
MAKSIKLQTSENDGPVASKNIEEVDPKAKREKVETRHQRESAITRAADERYEKIKQSEIH
IADLQRLTMKDLMQLAKEENLTEYTGLKKQDLIFKILKERTKVNGLMFGEGTLEILPDGF
GFLRSPDYHYLPCPDDIYVSPSQIRRFGLRTGAIVAGQIRPPKENERYFALLRVEAVNGC
DPEILTTKVFFDDLTPLHPKERLRLSSPAGNLSTRIVDLVAPVGMGQRGLIVSPPRAGKT
VMLQEMAKCVLGSHPGAYVFILLIDERPEEVTDMERQVGGDRCEVVSSTFDEPPSRHIQV
SEMVIEKAKRMVEYGEDVVIFLDSITRLARAWNTEVPHSGKILSGGVDANALQHPKRFFG
AARNVEEGGSLTIVATALVDTGSRMDEVIFEEFKGTGNTELHLDRRMVEKRIWPAIDVNR
SGTRREELLMDEEELRRVWILRRVLNDMNPVDAMELLTNRMRRTKTNEEFLLSMNLG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatccattaaacttcagacttctgaaaatgacggacctgtggcttcaaaaaat
atcgaagaggtagaccccaaggcgaagcgggaaaaagttgaaacgcgccatcaacgcgaa
tcggcgattaccagagccgccgatgaacgctatgagaaaatcaagcagagtgagattcat
atcgccgatctgcagcggctgacgatgaaagatctcatgcaattggccaaagaagaaaat
ctgaccgaatacacgggactcaaaaaacaggatctgatcttcaagattctgaaagagcgt
accaaagtcaacggcctgatgtttggtgaaggcacgctggagattctgccggatggattt
ggatttctgcgcagccccgattatcactatctgccctgcccggatgacatttatgtctct
cccagccagatccgccgctttggtttacgaaccggtgcaatcgtggccggccagattcgc
ccccctaaagaaaacgaacgttattttgcgttactccgcgtcgaagccgttaatggctgt
gatcctgaaatcctgacgaccaaagttttctttgacgatctgacaccacttcacccgaaa
gaacgtctccgactttcttcgcctgccggtaatttaagtacgcggattgtcgacctcgta
gctcccgtcggaatggggcaacgtggtttgattgtttctccgcctcgcgccggtaaaaca
gtcatgctgcaggaaatggcaaaatgtgtgctggggagtcatcccggtgcgtatgtcttt
atcctgctgattgacgaacgaccggaagaagtcaccgacatggaacgccaggtcggcgga
gatcgctgcgaagtcgtcagcagtacgtttgatgaaccgccgagccgtcatattcaggta
tcggaaatggtgattgaaaaagccaagcggatggtcgaatacggcgaagacgtcgtcatc
ttcctggattccattacccgattggcacgtgcctggaacacggaagtcccacattctggt
aagatcctgtctggtggtgtcgatgccaacgcgctgcaacaccccaaacggttcttcggt
gccgctcgtaatgtggaagaggggggcagcctgaccattgtcgccacagccctggttgat
acaggcagccgcatggacgaagtgatcttcgaagaattcaaaggaaccggtaataccgaa
ctgcacctggatcgtagaatggtcgaaaaacggatctggcctgcgattgacgtgaatcga
tccggaacacgacgcgaagaactgttaatggatgaagaagaactccgcagagtctggatc
ctcagacgcgtactcaacgatatgaaccctgtggatgccatggaactgctgaccaaccgg
atgcgtcgcaccaaaaccaatgaagaatttttattgagtatgaatctggggtaa
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