Gimesia fumaroli: Enr17x_41310
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Entry
Enr17x_41310 CDS
T09837
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
gfm
Gimesia fumaroli
Brite
KEGG Orthology (KO) [BR:
gfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfm03032
]
Enr17x_41310 (ihfB)
03036 Chromosome and associated proteins [BR:
gfm03036
]
Enr17x_41310 (ihfB)
03400 DNA repair and recombination proteins [BR:
gfm03400
]
Enr17x_41310 (ihfB)
DNA replication proteins [BR:
gfm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Enr17x_41310 (ihfB)
Chromosome and associated proteins [BR:
gfm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Enr17x_41310 (ihfB)
DNA repair and recombination proteins [BR:
gfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Enr17x_41310 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF4011
DUF1192
RNA_pol_Rpc34
PH_35
DUF8007
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QDV52072
UniProt:
A0A518IG54
LinkDB
All DBs
Position
5219372..5219830
Genome browser
AA seq
152 aa
AA seq
DB search
MTKKEIVKVISEEIGLTQLKTKEIVQKTFDAIVDTLVTDKRIELRNFGVFEVKKRAARKA
RNPRTGDRVDVEEKYVVTFKPGKEMEKRVRNLEEEAARLKAAASQPQASAPAASQPQQTP
PAAPQSPGSAPGTPQVGTYNNGSYPSGTQHTP
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaaaaagagatagtcaaagtaatttcggaagagattggtctgacgcaactcaag
acaaaagagatcgtgcaaaaaacgtttgatgcgattgttgacactcttgtcaccgacaag
cgcattgagctccgtaactttggcgtatttgaagtcaaaaagcgggcagcgcgaaaggcc
aggaatcctcgcacaggtgatcgtgtcgacgttgaagagaaatacgtcgtaacatttaaa
cctggcaaggaaatggaaaagcgtgtgcggaatctggaagaagaagcagcaagacttaag
gcagctgcttcacaaccacaggcgagtgctcctgcggcttcacagcctcagcagacacca
ccggcggcaccacaatctccaggttcagctccgggaaccccacaggtaggaacttataat
aacggttcatacccttcgggaactcagcatacaccttaa
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