Christiangramia forsetii: GFO_1049
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Entry
GFO_1049 CDS
T00448
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gfo
Christiangramia forsetii
Pathway
gfo00061
Fatty acid biosynthesis
gfo00071
Fatty acid degradation
gfo01100
Metabolic pathways
gfo01212
Fatty acid metabolism
gfo02024
Quorum sensing
gfo04146
Peroxisome
Module
gfo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GFO_1049 (fadD)
00071 Fatty acid degradation
GFO_1049 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GFO_1049 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
GFO_1049 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gfo01004
]
GFO_1049 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfo04147
]
GFO_1049 (fadD)
Enzymes [BR:
gfo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GFO_1049 (fadD)
Lipid biosynthesis proteins [BR:
gfo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GFO_1049 (fadD)
Exosome [BR:
gfo04147
]
Exosomal proteins
Exosomal proteins of breast milk
GFO_1049 (fadD)
Exosomal proteins of breast cancer cells
GFO_1049 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CAL66023
UniProt:
A0M078
LinkDB
All DBs
Position
complement(1120260..1122041)
Genome browser
AA seq
593 aa
AA seq
DB search
MNEIKRLFDFPYYQLENNPLDEALATKYDGKWKTISTQQYIDQANTISRGLLRLGVKPND
KIAVISTSNRTEWNVMDIGILQIGAQNVPVYPTISEDDYEYILNHSGATYCFVSDEEVLG
KVNSIKGTTELKEVYSFDQIAGCQNWKEILKSGEDKGNQDEVEKLKKAVKPDDLATIIYT
SGTTGRPKGVMLTHNNIVSDVLGSAPRVPFETGTYVALSFLPVCHIFERMILYLYQYYSV
SIYFAESIDKISDNLKEVKPHVITAVPRLLEKVYDKIIAKGTALGGVKQKLFYWAVELGL
EYEPYEANGWWYETKLKLARKLIFSKWKEGLGGNIELIVSGSAALQPRLTRVFAAAEIPV
MEGYGLTETSPVISVNDERNHGFRIGTVGKVLQNVKVKIAEDGEILTKGPNVMKGYYKDE
EKTKEVINEEGYFHTGDIGEIDKDGFLKITDRKKEMFKTSGGKYVAPQLIENTMKQSRFI
EQIMVVGDGEKMPSALIQPNFEFIEDWASKKNIDLGEGTPADIARNSMVRDRIQEEVDFY
NQKFGKWERIKTFEITPEAWTVEDEHLTPTMKLKRRIIREKYKDLYEKLYNRY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaataaaacgacttttcgactttccatattatcagcttgagaacaatccattg
gatgaagcattggcgaccaaatatgatggtaaatggaaaacaatttccactcaacaatat
atagatcaggcaaatacaataagccgtggtctattaagattaggggtaaaacccaatgat
aagattgctgtaatttccacttccaaccgaaccgagtggaacgtaatggatattggtata
cttcaaattggagcacagaacgttcctgtttatcctactatatcagaagatgactatgaa
tatatcttaaatcacagtggagcaacttactgtttcgtttcagatgaagaagtattagga
aaagttaattctataaaagggactacagaacttaaagaagtatatagttttgaccaaata
gcaggttgtcagaattggaaagagatacttaagagtggtgaagataaaggaaaccaggat
gaagttgaaaaattaaaaaaggctgtaaaacctgatgatcttgctactataatatatacc
tcaggaactactggcagacctaaaggagttatgttaacccataacaatattgtaagtgat
gttttaggaagtgctcccagagtaccttttgagaccggaacttacgtagccttgagcttt
ctaccagtttgccatatttttgaaagaatgattctttatttatatcagtattattcggta
tcgatctatttcgctgaatctattgataaaattagtgacaatcttaaagaggttaaacct
catgtgataactgcggtgcctcgacttctagaaaaggtgtacgataaaatcatcgctaag
ggaaccgcacttggaggagttaaacaaaagttattttactgggcagtagaattaggtctg
gaatatgaaccttatgaggcaaacggttggtggtatgaaaccaaactaaaacttgcgagg
aaacttattttttcaaaatggaaagaagggcttggtggaaacatagagcttattgtttcg
ggtagtgccgcacttcaaccaagacttacacgtgttttcgcagctgctgaaattcccgtg
atggaaggttatggtttaacagaaacctcgccggttatttcggtaaacgatgagcgtaac
catggtttcagaattggaaccgttggaaaagtgttgcaaaatgtgaaagttaaaattgcc
gaggacggggagattcttaccaagggacctaatgtaatgaaaggttattataaggatgaa
gagaaaacaaaagaggtaattaatgaagaaggctattttcataccggggatattggagaa
attgataaggatggattccttaagatcacagacaggaagaaagaaatgttcaaaacttcc
gggggaaaatatgtcgctccacagctgatagagaatactatgaaacaatcccgttttata
gaacaaatcatggttgttggcgatggtgagaaaatgccttcggctttaatccagccaaat
tttgaattcattgaagactgggctagtaaaaaaaatatagatcttggggagggaactcct
gcagatattgccagaaatagtatggtaagagatagaattcaggaagaagtagatttctat
aatcaaaaattcgggaaatgggaaaggatcaaaacttttgaaataaccccggaggcctgg
actgtagaagatgaacaccttactcctaccatgaaattaaaacgacgaataattagagaa
aagtataaagatctatacgaaaaactttataatcgttattaa
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