Christiangramia forsetii: GFO_1106
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Entry
GFO_1106 CDS
T00448
Symbol
priA
Name
(GenBank) primosomal protein N' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gfo
Christiangramia forsetii
Pathway
gfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GFO_1106 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfo03400
]
GFO_1106 (priA)
Enzymes [BR:
gfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFO_1106 (priA)
DNA repair and recombination proteins [BR:
gfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GFO_1106 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Cas3-like_C_2
nSTAND3
Zn_ribbon_6
Zn_Ribbon_TF
NPHP3_N
HVO_A0114
Motif
Other DBs
NCBI-ProteinID:
CAL66080
UniProt:
A0M0D5
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All DBs
Position
1175076..1177529
Genome browser
AA seq
817 aa
AA seq
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MPYFADLILPLPLENRFTYSLSQEEAEFIQPGMRLAVQFGKSRIYTGIVAEIHQNPPTIY
EAKPIHQILDKKPLLTKEQLAFWKWIASYYLCAEGDVMRAALPGAFLLESESIVKLSKDT
EIENEVLTDDEYLVVEALQRQSSMKIQEVEQLLDRKKVLPVINNLVAKNLVALNQEIYEQ
FKPKQVRYIKLNSIYEAEVEMHQLLDDLSRAPKQREIVLSYFSISAHSKKPLKVKELLNA
SGASNTVLKSLIDKKIFEEYYEETDRVVFSGEINQHEIILNKIQQKAFQELKDNFEERQV
CLLHGVTSSGKTEIYIRLIEEAINKGKQALYLLPEIALTTQLIKRLQNYFGDKVLVYHSK
YSVNERVEIYKKVLDNSEKGKIVIGARSCIFLPFQDLGLIVVDEEHESTFKQFDPAPRYH
ARDAAVVLANMFEANIVLGSATPSIESYFNAQHNKYSLVELNRRYGNVLMPEVEVVDIKT
AHRKKKMTGHFSERLVEEIKESLTEEEQVILFQNRRGFSPILECNTCGHSPQCPNCDVSL
TYHSHNNQLRCHYCGYHIAMQLQCMACGSNEVTTKGFGTEQVETELKALFPKSKIARMDQ
DTTRGKHAYEKIIQAFENHETDILIGTQMLTKGLDFRKVSLVGIMNADNLLNFPDFRAHE
RSFQLMLQVAGRSGRTKKRGKVLIQTYNPHHQIIQQVSTGDYLAMYKEQLEDRYQYQYPP
YFRLIRLTLKCKDYSKTNEAADWLARALENVFDRYVLGPEFPPVARIRNEYYKNILIKIP
QKRSLGKTKNMVHRILKSFNAIGAYRSVRVVVNVDPQ
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgccttatttcgctgatcttatcctgcctttacctcttgaaaaccgctttacctatagc
ctttctcaggaagaagctgaatttatccagccgggaatgaggttagctgttcagtttggt
aaaagcagaatatatacagggattgtcgcagaaatccaccaaaatccacccacaatatat
gaagcaaaaccaatacatcagatccttgataagaaaccattattaaccaaagaacaactt
gctttttggaaatggattgcaagctattatttatgtgctgagggagatgtaatgcgggct
gctttgcctggggcatttttactggaaagcgagagtatcgtgaagctttcgaaagatacc
gaaatagaaaacgaagttttaactgatgatgaatacctggttgttgaagccttgcagcga
caatcatcgatgaagattcaagaggtagagcaattactggatcgtaaaaaagtattaccg
gttataaataatctggtagcgaagaatctggtagctttaaatcaggagatctacgaacaa
ttcaaacctaagcaagtaagatatataaaactgaattcgatttacgaagctgaagttgaa
atgcatcagcttctggacgatctctcaagagcaccaaaacaaagagaaattgtattgtct
tatttttcaatttcagctcattcaaagaagcctctcaaggtaaaagagttattaaatgct
tccggagccagtaatacggttttaaagagccttattgataagaaaatttttgaagaatac
tatgaagagacagatagggtcgttttttcaggagaaatcaatcaacatgaaataattctc
aataaaattcagcaaaaagcatttcaggaactcaaggataattttgaagagcgacaggta
tgcttattacatggagttacttcatccggtaaaacagaaatctatatccgtttaattgaa
gaagcgataaataaagggaagcaggctctgtacttgctaccggagatcgcgcttactaca
caactaataaaacgtcttcagaattactttggagataaagttttggtttatcatagtaaa
tactctgtaaatgaaagggtagagatttataaaaaagtattagataattctgaaaaagga
aaaatagtcattggagcaagatcctgtatatttctaccgtttcaggatttaggattgatt
gtggtagatgaagaacatgagtctacttttaaacaatttgatccggcgccacgctaccac
gccagagatgcagccgtggtattggcgaatatgtttgaggctaacattgtgttaggttca
gcaacaccttctatagagtcttattttaatgcgcagcataacaaatattccctggtggag
ttgaacaggcgctacggaaatgttttgatgccggaagttgaagtcgttgatatcaagact
gctcatcgtaaaaagaaaatgacgggacacttttctgaaagacttgttgaagagatcaag
gaaagtcttacggaggaggagcaggttattttatttcagaatagaagaggattttcgcca
attcttgaatgcaatacttgtggacactctccccaatgtcctaattgtgatgtaagtcta
acctatcacagtcataataaccaattgcgttgtcactattgcgggtatcatattgctatg
caacttcagtgtatggcttgcggaagtaatgaggttacgaccaaaggttttggtacagag
caggtggaaaccgaattaaaagctttgtttccaaaatctaagatcgccaggatggatcag
gatacgactcgtggaaaacatgcctatgaaaaaattattcaggcttttgaaaatcatgaa
accgatattttaataggaacacagatgctcaccaaagggttggattttaggaaagtaagc
ctggtggggataatgaatgcagataatcttctaaatttccctgatttcagagctcatgaa
agaagtttccagttaatgctacaggttgcgggaagatctgggagaacaaagaaacgaggt
aaagttttaatacaaacatacaaccctcatcatcaaattattcagcaggtttcaaccggg
gactatttagcaatgtataaagagcagctggaagatcggtatcaatatcaatatccgcct
tatttccgattaatacggttaacactaaaatgtaaggattattcaaaaactaatgaagca
gcagattggttagcccgagctttagagaatgtatttgaccggtacgttcttgggccagag
tttccacccgtagcaagaattagaaatgagtactataaaaatatcctgattaaaatccct
caaaagcgatcattggggaaaacaaaaaatatggtgcaccgtattttaaaaagttttaat
gctattggagcgtataggtctgtaagggtggtggtaaacgttgatccacaataa
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