Christiangramia forsetii: GFO_1443
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Entry
GFO_1443 CDS
T00448
Symbol
hupB
Name
(GenBank) histone-like bacterial DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
gfo
Christiangramia forsetii
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfo03032
]
GFO_1443 (hupB)
03036 Chromosome and associated proteins [BR:
gfo03036
]
GFO_1443 (hupB)
03400 DNA repair and recombination proteins [BR:
gfo03400
]
GFO_1443 (hupB)
DNA replication proteins [BR:
gfo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GFO_1443 (hupB)
Chromosome and associated proteins [BR:
gfo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GFO_1443 (hupB)
DNA repair and recombination proteins [BR:
gfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GFO_1443 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Arteri_nsp7a
VWA_2
DUF6927
Motif
Other DBs
NCBI-ProteinID:
CAL66416
UniProt:
A0M1C1
LinkDB
All DBs
Position
complement(1491562..1491834)
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AA seq
90 aa
AA seq
DB search
MNKTDLIDAMAENAGISKAAAKKALESFLENVEKSLKKGDRVSLVGFGSWSVSKRAAREG
RNPQTGKTIKIAAKNVVKFKAGADLQKAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatttaatcgatgcaatggctgagaacgctggaatttctaaagcagca
gcaaaaaaagcattagagtctttccttgagaacgttgaaaaatcacttaaaaaaggagat
agagtatcattagtaggattcggatcttggtctgtatctaagagagctgctcgtgaagga
agaaacccacaaaccggaaaaactattaagattgctgctaagaacgtagtgaaatttaaa
gccggagcagatttacaaaaagctgtgaactaa
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