Christiangramia forsetii: GFO_1830
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Entry
GFO_1830 CDS
T00448
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gfo
Christiangramia forsetii
Pathway
gfo03030
DNA replication
gfo03430
Mismatch repair
gfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFO_1830 (dnaX)
03430 Mismatch repair
GFO_1830 (dnaX)
03440 Homologous recombination
GFO_1830 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfo03032
]
GFO_1830 (dnaX)
03400 DNA repair and recombination proteins [BR:
gfo03400
]
GFO_1830 (dnaX)
Enzymes [BR:
gfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFO_1830 (dnaX)
DNA replication proteins [BR:
gfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFO_1830 (dnaX)
DNA repair and recombination proteins [BR:
gfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFO_1830 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_14
AAA_5
Rad17
RCF1-5-like_lid
AAA_18
AAA_30
DNA_pol3_gamma3
DNA_pol3_delta_C
TIP49
Mg_chelatase
AAA_19
AAA_16
nSTAND3
AAA_24
NTPase_1
RNA_helicase
AAA_7
NPHP3_N
AAA_2
AAA_assoc_2
TsaE
SRP54
Sigma54_activ_2
DUF815
AAA_28
T2SSE
ABC_tran
NACHT
GNAT_acetyltr_2
Motif
Other DBs
NCBI-ProteinID:
CAL66800
UniProt:
A0M2F5
LinkDB
All DBs
Position
1916924..1918885
Genome browser
AA seq
653 aa
AA seq
DB search
MEHFVVSARKYRPQTFKDVVGQQAITNTLANAINNNHLAQALLFTGPRGVGKTTCARILA
KMINQKETQDPNEDFAFNIFELDAASNNSVDDIRNLIDQVRIPPQVGNYKVYIIDEVHML
SASAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVTDAKNYLAHIA
EQEGVNAEDDALHIIAQKADGAMRDALSIYDRVVSFSGNDLTRQAVTENLNVLDYDTYME
VTDLVLENNIPQLLVKFNDILSSGFDGHHFIAGLASHFRDLLVCKDQKTIILLEVGEQTK
AKYFEQSQKASHQFLFEAIELANSCDLKYKSSHNQRLLVELCMMQLASITFDSEKKKSDR
KIIPASNFEQEAVSIPSEKKELVRENEHDISSPSEESSIPKPKVATETCAKENEEPYYSE
ESPAEINSVGEIPEEAEIQKKTEISDFTENEAQKTGEEDSEKPKTSNSEIVNQDDKDAFE
TAAEEPSKETQPAKKAFPDIKREKVSGLSIKSIGRKKELAEQQKAMMPVEEVMDDDFNEE
DLVKQWKNYTEKLKRKGEKILASIFESQIPTLEDRNIHLTFPNETMKLDLEREENRLMTY
LKAHLRNTHISLIIHVDEATSRKYAFTPQEKYEKLKEANPLLDKLRATFDLDV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggagcatttcgtagtatcggcaagaaaatacaggccacaaacctttaaggatgtcgtt
ggccagcaggctatcacaaataccctggcaaatgccataaataataaccacctggctcag
gcattattatttacgggacctcgtggggttggtaaaactacctgcgctcgtattcttgca
aaaatgatcaatcagaaggaaacgcaggatcccaatgaggatttcgcattcaatattttt
gaactggatgccgcctctaataactctgtagatgatattcgaaatttaatcgatcaggtt
agaattcctccgcaagttgggaattacaaggtctatattattgatgaggtgcatatgtta
tctgcatcggctttcaatgcatttttgaaaacactggaagagccaccaaaacatgctatt
ttcatcctggcaactacagaaaagcataagattatcccaacgatactctcccgttgtcag
attttcgatttcaaaagaattaccgttaccgatgcaaaaaattacctagcccatatcgct
gaacaggaaggcgtaaatgcggaagatgacgccttacatattattgcccagaaagcagat
ggcgccatgcgtgatgctctttccatctatgatagagttgttagttttagtggaaatgat
cttacaaggcaggcagttacagaaaacttaaatgttctggactacgatacctatatggag
gtaaccgaccttgttcttgaaaataatattccacaattactggtcaaattcaatgatatt
ttatccagcggtttcgacggacatcattttatagccggtcttgcatcccatttcagagat
ctgttagtttgcaaagatcaaaaaacaattattcttctagaggttggagaacaaacaaaa
gccaaatatttcgagcagtcccaaaaagcttcacatcagtttttatttgaagctatagag
cttgctaattcctgtgatctcaaatataagagcagtcataatcaaagattgctggtagag
ctttgcatgatgcaacttgcttctatcacctttgattcagaaaaaaaaaagtctgaccgg
aaaataattccagcttcaaattttgaacaggaagcagtaagcattccttctgaaaaaaaa
gaacttgttagagaaaatgaacatgatatttcttctccttcagaagaaagttcaattccc
aaacctaaagttgccactgaaacctgcgcaaaagaaaatgaagagccttattattcagaa
gaaagtcctgcagaaataaattccgtaggagaaatacctgaagaagctgaaattcagaaa
aaaactgaaatcagtgattttactgaaaatgaagctcaaaaaacaggtgaagaagattca
gaaaaaccaaaaacttctaattctgaaattgtaaatcaggacgataaggatgccttcgag
actgctgcagaagaaccttcaaaagaaacccaacctgcaaaaaaagcttttcctgatatt
aaaagggaaaaggtctctggcctctccattaaaagtattggcaggaaaaaagaacttgct
gagcagcaaaaggcgatgatgcctgtagaggaagtgatggatgatgattttaatgaagaa
gatcttgttaaacagtggaaaaattacaccgaaaaattaaagagaaaaggagaaaaaata
cttgcttctatttttgaatcgcagattccaactctggaagataggaacattcatcttact
ttcccaaatgagaccatgaaactggatctcgaaagagaagaaaacaggttgatgacctat
ttaaaagctcatttacgaaacacgcatattagccttattattcatgtagatgaagccact
tccagaaaatatgcttttactccacaggagaaatatgaaaagctaaaagaggcaaacccg
ctacttgataaattaagggcaacatttgatttagacgtttaa
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