Christiangramia forsetii: GFO_1903
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Entry
GFO_1903 CDS
T00448
Name
(GenBank) eukaryotic DNA topoisomerase I-like protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gfo
Christiangramia forsetii
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfo03032
]
GFO_1903
03400 DNA repair and recombination proteins [BR:
gfo03400
]
GFO_1903
Enzymes [BR:
gfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GFO_1903
DNA replication proteins [BR:
gfo03032
]
Prokaryotic type
DNA Topoisomerases
GFO_1903
DNA repair and recombination proteins [BR:
gfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GFO_1903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CAL66868
UniProt:
A0M2M3
LinkDB
All DBs
Position
1996920..1998002
Genome browser
AA seq
360 aa
AA seq
DB search
MTLSPDDVETVMSNPHEAVKLANLRYVSENLLSIERKKVGRGFAYYKKEEKISDKKTLER
IKELVIPPAWKDVKITHLSNGHLQVVGRDEKERKQYLYHATWSKIRNQTKFFKMTSFGKM
LPKIRKQVDSDLSLEGMPKRKVLALVIRLMEETHIRVGNHYYAKNNKTYGLSTFRTRHVK
TFKNGIKFEFIGKKGKEHSITVEDKLLIDLINQCEEIPGWELFKFYNENGEKQSIDSEMI
NDYIHEISGDMYSAKDFRTWSASKIFFETLIEKGYIEDEKENKKNILEGFDAAAEGLGNT
RAVCRSYYIHPKLIETYETGEIIPYFKKVKEDKAPTYAQLSETEKVIHKLIKDYKIKIED
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgtcgcctgatgatgttgaaacagtaatgtctaacccacacgaagctgtaaaa
ctggcaaatcttcgatacgtttctgagaaccttttatctattgaaagaaaaaaagttgga
cgaggctttgcttattataaaaaggaagaaaaaatttcagataagaagactcttgaaaga
attaaagaattggttattccacctgcatggaaagatgtgaaaattactcatctctctaac
ggacatcttcaagttgtggggagagatgaaaaggaacgaaaacaatacttatatcatgcc
acctggtcaaaaattcgaaatcagacgaaattttttaaaatgacttcttttggtaaaatg
ttaccaaaaattagaaaacaagtagattcagatttgtcattagaaggtatgcccaaaaga
aaagttttggcgcttgtgatcagactcatggaagaaacacatattagagtcggaaatcat
tattatgccaaaaacaataaaacttatggcctatcaacttttagaacccgacatgtaaaa
acctttaaaaacggaattaaatttgaatttattggaaaaaaagggaaagaacattcaatt
actgttgaagacaagctattaatagaccttatcaatcaatgtgaagaaataccgggatgg
gagcttttcaaattctataatgaaaatggtgaaaaacaaagtatagatagtgaaatgatc
aatgactacatccatgaaattagcggtgatatgtattcggcaaaagatttcagaacctgg
tctgcttccaaaatattttttgaaacacttattgaaaagggatatatcgaagatgaaaag
gaaaataaaaagaatattcttgaaggttttgatgcggctgcagaaggtttagggaatact
cgcgctgtttgtagaagttattatattcatccaaaacttattgagacttatgaaacaggc
gagataatcccttattttaaaaaagtaaaggaagacaaagcgccaacctatgcgcaactt
tcagaaactgaaaaagtaattcataaacttataaaggattataaaataaaaattgaagat
taa
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