Christiangramia forsetii: GFO_1905
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Entry
GFO_1905 CDS
T00448
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gfo
Christiangramia forsetii
Pathway
gfo03030
DNA replication
gfo03430
Mismatch repair
gfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFO_1905
03430 Mismatch repair
GFO_1905
03440 Homologous recombination
GFO_1905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfo03032
]
GFO_1905
03400 DNA repair and recombination proteins [BR:
gfo03400
]
GFO_1905
Enzymes [BR:
gfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFO_1905
DNA replication proteins [BR:
gfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFO_1905
DNA repair and recombination proteins [BR:
gfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFO_1905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Flu_NS2
CAF1
Motif
Other DBs
NCBI-ProteinID:
CAL66870
UniProt:
A0M2M5
LinkDB
All DBs
Position
1999962..2000633
Genome browser
AA seq
223 aa
AA seq
DB search
MIRKWFNKKTPNQDLPYFWQNYAQSFEEKLPEEVSDIRFIVFDTETTGFNYDEDRVLSIG
AVRIENNSIEISDNFEVFLEQKKFNPETVKIHGIIQNEKFEKLSELEALKKFLSYIQNSV
LVAHHAGFDMKMINKALSRNGLPKLKNKVLDTSILYKKTRIATNFIDRDKIYSLDEIAEA
YNIDLIDRHTASGDAYITALIFMKLLSRLKKNKDSTLKDIYKL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgattaggaaatggtttaataaaaagactccaaatcaagaccttccatatttctggcag
aattacgctcaaagtttcgaagaaaaactaccggaagaagtttctgatattagatttata
gtatttgataccgagacaacaggttttaattatgatgaagatagagttctaagtatcgga
gccgtgagaattgaaaataacagcattgagataagcgacaattttgaagtatttctggaa
caaaaaaaattcaatcctgaaaccgttaagatccatgggatcattcagaatgaaaagttc
gagaaattatcagaattagaagcgctaaaaaaatttcttagttatattcaaaattccgta
ttggttgctcatcacgctggttttgatatgaaaatgatcaataaggcactttccagaaac
ggacttcctaaactgaagaataaagtgctggatacttccatactctataaaaaaacccgt
attgccaccaattttatagatcgggacaagatttattctttagatgagatcgctgaagct
tataatattgatcttatagatagacataccgcttctggtgatgcctatattactgctttg
atttttatgaaattactgagccgtttgaagaaaaataaagattcaactttaaaagatatt
tacaaattataa
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