Christiangramia forsetii: GFO_2323
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Entry
GFO_2323 CDS
T00448
Name
(GenBank) PcrA-like UvrD/Rep family ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gfo
Christiangramia forsetii
Pathway
gfo03420
Nucleotide excision repair
gfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GFO_2323
03430 Mismatch repair
GFO_2323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfo03400
]
GFO_2323
Enzymes [BR:
gfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFO_2323
DNA repair and recombination proteins [BR:
gfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GFO_2323
MMR (mismatch excision repair)
Other MMR factors
GFO_2323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAL67288
UniProt:
A0M3U3
LinkDB
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Position
complement(2466835..2469198)
Genome browser
AA seq
787 aa
AA seq
DB search
MHFSYLSVFKNGENLEAYLAELNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTYRIAYLMN
QGVDAFNILSLTFTNKAAREMKQRISKIVGSSEAKNLWMGTFHSVFAKILRFEADKMGYP
SNFTIYDTQDSHSVIRAIIKEMRLDKDVYKYKQVYNRISSYKNSLITVKAYFQNPELQEA
DAMSKKPRLGEIYKAYVDRCFKAGAMDFDDLLLKTNELLNRFPEVLHKYQSRFKYILVDE
YQDTNHSQYLIVRALSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQMYRLEQ
NYRSSKNIVEAANSIIDKNQTKLDKIVWTANEDGPKIIVNRLLTDGEEGRYVASSIFENK
MQNQMDNGDFAILYRTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLILN
PKDEEALKRVINYPSRGIGQTTMDRLAIAANQHKISMFEVIKNIDKLELKINRGTQTKLV
NFVNMIRSFAIMNETSDAFQIAETVTKKTGLVQELKKDGTPEGIARIENIEELLNGMRDF
VEGQKELADATGSLSEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPYVYIVGMEE
DLFPSGMSMNTRSELEEERRLFYVAITRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEID
DQYLDLMVPQDDYKYKPLIDTDIFGDAVDKSKLRQTKPKSGTPPPAHKPSEEQLRKLRKL
KPAATEPSKARNTLDLAEGNEVEHMRFGRGTVMKLEGVGQDRKAEIEFDQGGIKKLLLRF
AKLKVLS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
gtgcattttagttacctttcagtttttaaaaacggagaaaatttggaagcttatttagct
gaattgaatgatgcacagagggctccggtgctgcaaaaagatggccctatgatcgtaatt
gccggagcaggttccggtaaaacgagggtgcttacttacagaatcgcttatctaatgaat
cagggggtagatgccttcaatatcctttcgctaacctttaccaataaggcagcacgggaa
atgaagcagcgtatttccaagatcgttgggagtagtgaggctaaaaatttatggatggga
actttccattcggtttttgccaagatcttaaggtttgaagcagataagatgggatatcct
tcaaatttcaccatttatgatacgcaggattcgcatagtgtgatcagggcgattataaaa
gaaatgaggctggataaggatgtttataaatataagcaggtttataaccgcatctcttct
tataagaacagtcttattaccgtaaaagcctattttcagaatcctgaacttcaggaagcc
gatgcgatgtctaaaaaaccacgtttaggagaaatttataaagcatatgtagatagatgt
tttaaagccggagcgatggattttgatgatcttcttctgaaaaccaatgaacttttaaat
cgttttccggaagtactgcataaatatcaaagcaggtttaaatatattctggtggatgag
tatcaggataccaatcattcccagtatttaattgtaagagcactttcagataagtttcag
aatatatgcgtggttggagatgatgcgcaaagtatttatgctttccgcggagcgaatatt
aataacattctgaatttccagaaggattatgataatgtacagatgtaccgactggaacag
aattatcgttcttctaaaaatatcgtagaggctgcgaactccattattgacaagaaccag
acgaaactggataaaatagtttggacggcaaatgaagatggtccaaagatcattgtaaat
agattgcttacagatggtgaagaaggaagatatgtagcgagttctatttttgagaacaaa
atgcaaaatcagatggataatggtgattttgcgattctttatagaaccaatgcccagagt
agggcgatggaagatgcgcttcggaaaaaagatattccttatagaatttatggcggactt
tctttttaccaaagaaaagagatcaaagatgtgcttgcctatttacggttgatcttaaat
ccaaaagacgaggaagccctaaaaagagtcataaattatccttcccgcggaatcggacaa
accacaatggataggttggcaattgcagccaatcagcataagatatccatgtttgaagtt
attaagaacattgataagctggaacttaaaattaatcggggaactcaaactaaactggtg
aatttcgtaaatatgatacgcagttttgcgatcatgaatgaaaccagcgatgcttttcaa
attgccgaaactgtcacaaaaaaaacaggattagttcaggaacttaaaaaagatggtact
ccggaaggtattgccagaattgaaaatattgaagagttacttaacggaatgcgggatttt
gttgagggacagaaagaactggcagatgcaaccggatcactttctgaatttctggaagat
gttgcgctagccacagatcttgataatgataccggagatgatgatagagtagccttgatg
accattcacttagctaaaggtctggaatttccttacgtatatattgtagggatggaggaa
gacctttttccatcagggatgagtatgaatacacgaagtgagctggaagaggagcgacga
cttttttatgtggctataaccagggcagagaaacaggcttatttaacgtatacgttatcc
aggtatcgctggggaaaacttgtggatgcagaacccagccgttttattgaagaaatagac
gatcaatatctcgacttaatggtgccgcaggatgattataaatataaacctctgatagac
accgatatttttggtgatgcggtagataaaagcaaattacgtcaaacgaaacctaaaagt
ggaactccgccaccagcacataaaccttccgaagagcaacttcggaaactgagaaaatta
aaaccagcagccactgaaccttcaaaagctagaaatacattagaccttgctgaaggaaat
gaagtggaacatatgcgctttggaagaggaacggtgatgaaattagaaggagtagggcag
gacagaaaagcagagatagagtttgatcaggggggtattaagaaattattgttacgtttt
gccaagttaaaagtactttcatag
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