Christiangramia forsetii: GFO_2655
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Entry
GFO_2655 CDS
T00448
Name
(GenBank) protein containing exonuclease domain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gfo
Christiangramia forsetii
Pathway
gfo03030
DNA replication
gfo03430
Mismatch repair
gfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFO_2655
03430 Mismatch repair
GFO_2655
03440 Homologous recombination
GFO_2655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfo03032
]
GFO_2655
03400 DNA repair and recombination proteins [BR:
gfo03400
]
GFO_2655
Enzymes [BR:
gfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFO_2655
DNA replication proteins [BR:
gfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFO_2655
DNA repair and recombination proteins [BR:
gfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFO_2655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
Rv2179c-like
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
CAL67611
UniProt:
A0M4R6
LinkDB
All DBs
Position
2772602..2774125
Genome browser
AA seq
507 aa
AA seq
DB search
MKDVKFAITDIETTGNGIKGNRITEICVIVVQNGKVIDEYSSLVNPSQAIPLYIETLTGI
NDEMVFNAPQFSEIADEITKITKDCIFVAHNVNFDYNIIRAEFASLDRDFKRKRLCTVRL
TKKLIPGLFSYSLGNICTSINIPHIDRHRAKGDCDATVTLFQRCISLDPEFEVINQLLNQ
KTAASYLPPNFKSSDFEKLPITTGVYFFKDKDGRPLYIGKAKNIKSRIKSHFQEKSNRKY
KLMQETYSIDYELTGNELLALLRESELILKFFPKYNKAQKKVSRPYTLTSYHNQKGIEQF
ALHKNKIAPVSWMKFYTREEAIKFMEFLCEEFQLCPKYCGLQTGVKICDHYKITNCGGVC
KGEVSKEEYNARVEKAIEYIERYDDSCLLLEKGRTREEKSFIYLNKGKYAGYGYIGPSDD
FNHPEEFKNFLTPAKNSSYADRIVSRYLKIKRNFTKISLSNDEEEPEDLVEHTGIMGAGP
HRNSTNRRSSCYENLQITRKIGLFSVH
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtcaagttcgccattactgatattgaaaccaccggcaacgggattaaggga
aacagaattactgaaatttgtgtaatcgttgttcagaacggaaaagtgatcgatgaatat
tcatctttggtaaatccaagtcaggccattccactctatatcgaaactttaaccggtata
aatgatgaaatggttttcaatgctccgcagttttcagaaatagccgacgagataacaaag
atcaccaaagactgcatttttgtagcacataatgtgaattttgactataatattattcga
gcagaatttgctagtctggatagggattttaaacggaaaagactttgcactgtacggctt
acaaaaaaactaatcccgggactgttttcttatagtctgggaaatatttgtacctctatc
aatattccgcatatagatcgccacagagcgaaaggtgattgcgacgccacggttacactc
ttccaacgttgtatttcactggatccggaatttgaagtgataaatcagttgctgaatcaa
aagaccgcggcttcttatttacctccgaattttaaaagttcagattttgaaaaacttcct
attactaccggagtttacttctttaaagacaaagatggcaggccgctatatattggaaaa
gcaaagaatataaaaagccgtataaagtctcattttcaggaaaaatcgaaccgaaaatat
aaattgatgcaggaaacctacagcatcgattatgaacttaccggaaatgaattgctggcg
ctattgagggaatctgagttgattctgaagttttttccgaaatataacaaagcgcagaaa
aaagtaagccgaccctacaccctcacttcttatcataatcaaaaaggaatagagcaattt
gctttacataagaataagatcgccccggtgagttggatgaaattctatacacgcgaggaa
gctataaaatttatggaattcctttgtgaggagtttcagctttgtccaaaatattgtggt
ttacagacgggtgttaaaatatgtgaccattataagatcacgaattgtggtggcgtatgt
aaaggtgaggttagcaaagaagaatataatgcccgcgttgaaaaagcgattgaatatatc
gaaagatatgatgattcctgcctgcttcttgagaaaggtcgtacaagagaagaaaagtct
tttatctatctcaataagggtaagtatgcgggctatggatatataggcccttctgatgac
tttaaccatcctgaagaatttaaaaatttcctgacaccggcgaaaaattccagctatgcc
gatagaatcgtaagcagatacttaaaaataaagagaaattttactaaaattagcctcagc
aatgatgaggaggagccagaagatttagtagaacacacgggtattatgggggctggacca
catagaaactctaccaatcgccggagtagctgttacgaaaaccttcagattacgagaaaa
ataggtctctttagtgttcactga
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