Christiangramia forsetii: GFO_3038
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Entry
GFO_3038 CDS
T00448
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gfo
Christiangramia forsetii
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfo03016
]
GFO_3038 (truB)
Enzymes [BR:
gfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GFO_3038 (truB)
Transfer RNA biogenesis [BR:
gfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GFO_3038 (truB)
Prokaryotic type
GFO_3038 (truB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF4881
Motif
Other DBs
NCBI-ProteinID:
CAL67982
UniProt:
A0M5T7
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All DBs
Position
3198223..3198987
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AA seq
254 aa
AA seq
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MLFIVLWWDSRLLFLHMHNKEFTPEEFKTGQVLLFDKPLNWTSFQVVNKVRWLIRKSCNI
KKIKVGHAGTLDPLATGLLIICTGKFTKTIPQLQGLIKEYTGTFTLGATTPSFDLETEID
QKFPTNHITEELLNATSKKFIGEIEQTPPVFSALKKDGKRLYEYAREGKEVEVKSRMVEI
SEFEIDSKNFPKIDFRVVCSKGTYIRSLAHEFGQALHSGAHLSELRRTAIGDYSVEKAMD
IESFEKLLPSRETN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgctatttattgttttgtggtgggactcgcggctattatttttgcatatgcacaataag
gaatttactccagaagaatttaaaaccggacaggtattactttttgataaacccttgaat
tggacctcttttcaagttgtaaacaaagtaagatggttaattagaaaaagttgcaatatc
aagaaaatcaaggttggtcacgccggaactttagatccattagcgactggattattgatc
atttgcaccggtaaattcactaagacgatcccgcaactacagggactgatcaaagaatac
accggtacttttactttaggcgctacgactccatcatttgacctggaaaccgaaattgac
cagaaattccccacaaatcatattacggaagaactactcaacgcaacttctaagaaattt
attggcgaaattgagcaaacaccacctgtattctccgctttaaagaaagacggaaaaaga
ctttacgaatatgcccgggaaggcaaggaagttgaagtaaagtccagaatggtagaaatt
tcagaatttgagatcgactccaaaaactttccgaagattgattttagggtggtttgcagt
aaagggacttatattagaagtcttgcccacgaatttggtcaggctttgcatagtggcgct
catctttcagaattaaggagaaccgctattggagattattccgtagaaaaagcgatggat
attgaatctttcgaaaaattactaccttcacgagagactaattaa
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