Christiangramia forsetii: GFO_3213
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Entry
GFO_3213 CDS
T00448
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gfo
Christiangramia forsetii
Pathway
gfo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GFO_3213 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfo03400
]
GFO_3213 (mutM)
Enzymes [BR:
gfo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GFO_3213 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GFO_3213 (mutM)
DNA repair and recombination proteins [BR:
gfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GFO_3213 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CAL68156
UniProt:
A0M6B1
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All DBs
Position
complement(3376544..3377425)
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AA seq
293 aa
AA seq
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MFYLYKTLKYPDSYRDRVTLKFDNLGTFNKQIEMPELPEVAYQKIYVDSTSLHHKIVKVD
MGADKIFQSPKSEFEATLLKNEFVSSTQIGKYLLLKLKEKGYLVVHFGMTGKMDYFQHDE
IQKHAQLTLTFEDGGKLSFVCPRKFGKLFLTTSPDEFRKKQKLGPHATEISEEDFHNLFD
GKRGSVKTALMDQSFIAGLGNLYVDEILFQSGIHPKSKSENLSDKDLSNMFKNMVAILET
VTKSKTEGNPIPDTYLRNHRNEGEACPIAKGKIKMIKVGGRSTYFCSECQEEK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgttttatctttataagaccctgaaatatcccgatagctatcgggacagggtgacctta
aaatttgataacttagggacattcaataaacaaatagagatgccagaattaccggaagta
gcctatcaaaaaatatatgtagattcaactagtctccaccataaaatagtgaaagtggat
atgggagctgataaaatttttcaatcaccaaaaagtgaatttgaagcaactttgcttaaa
aatgagtttgtttccagcacacagattggaaaatatctattgttgaaattgaaggaaaaa
gggtatctggtagtgcattttggtatgaccggcaagatggattattttcagcatgatgag
attcaaaaacatgcacaactcactttaacttttgaagacggtggaaaactttcatttgta
tgtcccagaaaatttggaaagctttttctaacaacaagcccggatgaattcagaaaaaaa
cagaagctgggtccgcatgcaacagaaatatcagaagaagattttcataacttatttgac
ggcaaaagaggtagtgtgaaaacagcgttgatggatcagtcttttattgccggacttgga
aatttatatgtagacgaaatactatttcagagtggaattcatcctaaatcgaagtctgag
aatctctctgataaagatctttcaaatatgtttaaaaacatggtggctattctcgaaacg
gttaccaaaagtaaaacagaaggaaatccaattcccgatacttacttaagaaatcataga
aatgaaggcgaagcttgtcctattgctaagggcaaaataaaaatgataaaagtgggagga
agaagcacttatttttgttcggaatgtcaggaagaaaaatag
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