Geospiza fortis (medium ground-finch): 102031461
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Entry
102031461 CDS
T03755
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF like domains 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102031461 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102031461 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_4th
Ig_DSCAM-DSCAML_C
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
102031461
NCBI-ProteinID:
XP_014164136
LinkDB
All DBs
Position
Un
AA seq
1552 aa
AA seq
DB search
LVALGWCLWAAAEVPLGDFYPFGPAQGDAATRKQDDGGSELRPLSIPFPFFGAGHTGLYV
NNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRRAGEIYYRESTEQPILDRASR
DIAQYFPEFPDFSAQWVFIATWYRVTFFGGNSFSPVNTFQIVLITDGKLSFTIFNYESIT
WTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIADVEMTTNVGIPGRWV
FRIDDAQVQVGGCSNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLAGFTGKRCHVDV
DECLSHPCQNGATCLNGAGRFTCRCPPGFKGNSCETAESPCENRVCQNGGSCQVVNRTAA
CLCQSGYTGEDCQTEVNECESSPCLNGGHCMDLVDNYTCVCLEPFVGQRCETDSSSCEDR
SCQNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRMPGACLSQPCQNAGSCLETERGYVC
ECQEGYTGQDCRDQLSEGCECRNGGSCLEGNVTVCQCLPGFFGLLCEFEVTTTPCNMNTQ
CPDGGYCMEYGGSYLCVCHTNYGTNHTMPSPCDSEPCLNGGSCKVHDDSYSCECPQGFLG
MHCEKAKPRLCSTGPCRNGGTCREADGEYHCSCPYRFTGKHCEIGKPDPCASGPCQNGGT
CFHYIGKYKCDCPPGYTGRHCEIVPSPCFLSPCENGATCEDLGGGYACTCSLGYVGKHCQ
FEVDCGIPSEVKHAQASFNSTKVGSLAEYQCELGYILSQHNHPRVCRVPGVWSDPPECDE
IDECQSQPCLNGGQCKDRVSAFLCLCEPGYTGHHCELDVDECQSEPCKNSGTCQDLPGSF
ACSCPEGFLGTQCETEVDACESDPCQNGGECESYGGSYLCVCPEGFFGYHCETASDPCFS
SPCGTRGYCLASNGTHSCICKVSYTGKSCEKELLPPTSLKVERVEDTGVLISWHPPEDAA
ARQLIDGYAVTYVSLDGSYRRTDFVDRSRSAHQLRALTSGRAYNISVFSVKRNVNNKNDI
SRPVMLTTRTRPRPVEGFEISNVTASAITVQWALHRLQHSTVSRVRVSIRHTGDLAARTV
ELNSSVAKYTFLDLQPGERYIIHVTTLSGLGVEDHPSESLATAPFHVWTRPLPPQNLTAS
HVTATSVSMAWEQPPVGTMEGYIINVTTAQSVKSRYVPNGKLVSYTVRDLLPGQRYHLSL
TAVQNTEQGQLHSEPIHLHVSTLQRDGAPERRWSQAGHPRVLRNRLPPAFLPELRLLADR
DTAEEPSSAPRFTELVDGRGRISARFGPALGRSITVKTQPEAPVKLENTEVSSWDSLALQ
LREAKSKREGQNCSKNPCRNGGTCTRDEESYHCACRPGFKGRLCQLACKKVPHSCTRLYS
ETRAFPVWEGGTCHYLSRRVYKVHQDICYKESCESTTSKRTSSRYSPQXPHWMSQPCCDP
GQGDVPGWCGPACRGTPGWGLGWQCCVFACEQWPRGMGLTVLSSLLLQKAKQQSHTEEAL
EVSTCSSPPQMQAGAVLMQGVREVGAGQGTTSAHAAMSRGWFKAVEASSFHI
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
ctggtggcactgggctggtgcctgtgggccgctgcggaggtgccgctgggcgacttctac
cccttcgggccggcccagggcgacgccgccacgcggaagcaggacgatggtggctccgag
ctccggcccctctccatccccttccccttcttcggagcggggcacaccggcctctatgta
aacaacaacgggattatctcattcctgaaggaggtgtcccagttcacaccagtggccttc
cccatctccaaggaccggcgtgtggttgctgctttctgggcagatgtggataatcggcgg
gcaggtgaaatatattaccgagagagcaccgagcagcccatcttggacagagccagcagg
gacattgcccagtatttccctgagttcccggatttttctgcacagtgggtcttcattgca
acctggtaccgagtcaccttcttcgggggcaactcattctcaccagtaaacactttccag
attgtgctcatcacagatggcaagctttccttcaccatctttaactatgagtccatcacc
tggaccacgggtatgcacgccagcagtgggggggactttgctgggctcggtggcatcgca
gcacaggcaggttttaacgctggtgatggaaagcgctacttcaacatccccggatcccgc
accgatgacatcgctgacgtggagatgacgacaaatgtgggtatccccgggcgctgggtg
ttcagaatcgatgatgcccaggtgcaagtggggggctgcagcaatacaacctctgtgtgc
ctgacactgcggccctgcctgaatggggggaagtgtattgaggactgcatcacagggaac
ccctcctacacctgctcctgcctggccggttttactgggaagaggtgccatgttgatgtg
gatgagtgcctctcccacccatgtcagaacggagccacctgcctcaacggtgctggcagg
tttacctgcaggtgcccaccaggcttcaaaggcaacagctgtgaaactgcagaatcacca
tgtgagaacagggtatgccagaatggtgggagttgccaggtggtgaacaggacagcagca
tgcttgtgccaatcagggtacacaggggaagactgccaaacagaggtgaacgaatgtgag
tccagcccatgcctgaatggtgggcactgcatggacctggtcgataactacacctgtgtg
tgcctggagccctttgtgggacagcgctgcgagacagattcatcttcctgcgaggaccgg
agctgccagaaccggcagacgtgcaactacatccgccctggccgctacatctgcacctgc
tccccgggttattacggcaacaactgccagtacggtgggccccgcatgcccggcgcctgc
ctctcccagccgtgccagaacgcaggcagctgcctggagactgagaggggctatgtctgt
gagtgccaggagggctacactggacaggactgccgagaccagctctctgagggctgtgag
tgtcgtaatgggggcagctgtctggaggggaatgtcaccgtctgccagtgccttcctggg
ttttttggtctcctctgtgaattcgaagtcaccacgacaccgtgcaacatgaacacacag
tgcccggatggtgggtactgcatggagtatggcgggagctacctctgtgtctgccacacc
aactatggcaccaaccacacgatgccatccccctgcgactcagagccctgcctgaatgga
gggtcctgcaaggttcacgatgactcctacagctgcgagtgtcctcaaggcttccttggc
atgcactgcgagaaagccaagcctcggctctgcagcacggggccctgccgcaacgggggc
acctgcagggaggcggacggcgagtaccactgctcctgcccctaccgcttcaccggcaag
cactgcgagatcggtaagccggacccctgtgcctcggggccctgccagaacggaggcacc
tgtttccactacatcggcaagtacaagtgtgactgtcccccaggctacaccggccggcac
tgcgagattgtgccctctccttgctttcttagcccctgtgagaatggggctacctgtgag
gacctcggtgggggctatgcttgcacctgctccctgggctatgtagggaagcactgccag
tttgaggttgactgtggcatccccagtgaggtgaagcatgcccaggcttctttcaactcc
accaaggtgggctccctggctgagtaccagtgtgagctgggctacatcctcagccagcac
aaccacccccgtgtgtgccgcgtgccaggcgtctggagcgacccccccgagtgtgatgag
atcgatgagtgccagtcgcagccgtgcctgaatggtggccagtgcaaggatcgtgtctct
gccttcctgtgcttgtgtgagccaggttacaccggccaccactgtgagctggatgttgat
gagtgccagtcagagccctgcaagaacagcgggacctgccaagacctccctgggtccttt
gcttgctcctgtcctgagggcttcctgggcacccagtgtgagacagaagtggatgcctgt
gagtcagacccttgccaaaatggaggggagtgtgagagctacgggggctcctacctctgt
gtgtgcccagagggtttcttcggctaccactgtgagacagccagtgacccgtgcttctcc
agcccctgtgggaccagaggctactgcctggccagcaatggcacccacagctgcatctgc
aaagtcagctacacaggcaagagctgcgaaaaagaattgctgccaccaacctcattaaag
gtggaaagggtggaggacactggtgtgttgatttcttggcacccacctgaggacgcagct
gccaggcaactcattgacggctacgccgtgacgtacgtatccctcgacggctcttaccgc
aggacagattttgtggaccgaagtcgttctgcccaccaattgcgggcactaacctccggc
agagcctacaatatttctgtcttttcagtcaaacgcaacgtgaacaacaagaatgatatc
agcaggcccgtcatgctcaccacgcgcactaggccgcgcccggtggaaggctttgagatc
agcaatgtgactgccagtgccatcacggtgcagtgggccctgcaccgcctccagcactcc
actgtcagtagggtcagggtctccatccgccacacgggggacctggcagcccgcaccgtg
gagctgaacagcagcgtggccaagtacaccttcctggacctgcagccaggagagaggtat
atcatccatgtcacaacgctgagcggcctgggagtggaagaccacccctcagagagcctg
gccacagccccttttcatgtgtggacaaggcctctccccccacaaaacctcactgcctcc
cacgtcaccgccacctctgtgtccatggcgtgggagcagccgcctgtgggcaccatggag
gggtacatcatcaatgtcaccacggctcagagcgtcaagagccgctacgtgcccaacggg
aagctggtgtcctacacggtgcgggacctgctgccagggcagcgctaccacctgtccctg
acagctgtgcagaacacggagcagggccagctgcacagcgagcccatccacctccacgtc
agcaccttgcagagggatggggctccagagagacggtggagccaagccgggcacccccgg
gtcctgcggaacaggctgcccccagccttcctgccggagctccgcctgctggcagatcgc
gacacggctgaggagccctcgtctgcccccaggttcacggagctggtggatggcagaggg
aggatcagtgccaggtttggccccgcgctgggaagatccatcactgtgaagacacagcca
gaggctccagtgaagctggagaacacagaggtgtccagctgggacagtctggcactgcag
ctgcgtgaggcaaagagcaagagagaggggcagaactgctccaagaatccctgcaggaat
ggaggcacctgcacccgagatgaggagtcctaccactgtgcctgccgcccgggcttcaag
ggcaggctctgccagctggcctgcaagaaggtgccacactcgtgcacgcggctgtactcg
gaaaccagggcattccccgtgtgggaaggaggcacctgccactatctgtccaggagagtc
tacaaggtacaccaggatatctgctacaaggagagctgtgagagcaccacttccaagagg
acaagcagcaggtacagcccacagnncccacactggatgtcccagccttgctgtgatcct
ggacagggggatgtgcctggctggtgtggcccagcatgcagagggaccccaggctggggg
cttggatggcagtgctgtgtgtttgcctgtgagcaatggccaaggggcatggggctgaca
gtgctgtcctcccttctcttgcagaaagccaagcaacagtcacacactgaagaagcccta
gaagtaagtacctgctccagccctcctcagatgcaggcaggggcagttctcatgcaggga
gtcagggaggtgggtgcaggccagggcacaacctcggctcatgctgccatgtccaggggg
tggtttaaagcagtagaagcttcgtctttccacatctaa
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